ggKbase home page

qs_1_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 97 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_18_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3..152
DNA (150bp) protein (50aa)
Uncharacterized protein {ECO:0000313|EMBL:ABC44538.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_18_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

628..2931
DNA (2304bp) protein (768aa)
DNA polymerase III subunit tau {ECO:0000313|EMBL:CBH25697.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBH25697.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
DNA polymerase III subunit tau n=2 Tax=Salinibacter ruber RepID=D5HCE2_SALRM
DNA polymerase III subunits gamma and tau
qs_1_scaffold_18_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3100..3474
DNA (375bp) protein (125aa)
Nucleoid-associated protein SRU_2556 n=2 Tax=Salinibacter ruber RepID=Q2RZH7_SALRD
hypothetical protein
Nucleoid-associated protein SRU_2556 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
qs_1_scaffold_18_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3555..4370
DNA (816bp) protein (272aa)
Recombination protein RecR n=2 Tax=Salinibacter ruber RepID=RECR_SALRD
recR; Recombination protein recR
Recombination protein RecR {ECO:0000255|HAMAP-Rule:MF_00017}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_1_scaffold_18_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4453..5697
DNA (1245bp) protein (415aa)
Saccharopine dehydrogenase {ECO:0000313|EMBL:CBH25694.1}; EC=1.5.1.10 {ECO:0000313|EMBL:CBH25694.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
LYS9; saccharopine dehydrogenase
LYS9; saccharopine dehydrogenase id=24658501 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_1_scaffold_18_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(5679..6389)
DNA (711bp) protein (237aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEN74514.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEN74514.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJX3_RHOMR
qs_1_scaffold_18_7
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(6528..7172)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI0003806D70
Uncharacterized protein {ECO:0000313|EMBL:KER09412.1}; TaxID=1519464 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium
hypothetical protein
qs_1_scaffold_18_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7540..15354
DNA (7815bp) protein (2605aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCD8_SALRM
Uncharacterized protein {ECO:0000313|EMBL:CBH25693.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein
qs_1_scaffold_18_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15430..16233
DNA (804bp) protein (268aa)
lipB; Lipoyltransferase; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] id=24658499 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Octanoyltransferase {ECO:0000255|HAMAP-Rule:MF_00013}; EC=2.3.1.181 {ECO:0000255|HAMAP-Rule:MF_00013};; Lipoate-protein ligase B {ECO:0000255|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:000
lipB; lipoate-protein ligase B
qs_1_scaffold_18_10
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16276..16623
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ5_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49139.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_18_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16661..17032)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ6_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49140.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_18_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17094..17627)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ7_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49141.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_18_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17670..18038)
DNA (369bp) protein (123aa)
iojap family protein n=1 Tax=Salisaeta longa RepID=UPI0003B7B68A
iojap-like protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodo
qs_1_scaffold_18_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18245..18766)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDZ9_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49143.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_18_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18889..19470)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZI7_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45787.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_18_16
Thalassolituus oleivorans, Thalassolituus, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19838..20500
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DYC3_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK17157.1}; TaxID=1208320 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Thalassolituus.;" source="Thalassolituus oleivorans R6-1
qs_1_scaffold_18_17
unknown

Not on your lists

20467..20751
DNA (285bp) protein (95aa)

This feature has no annotations

qs_1_scaffold_18_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

20952..21305
DNA (354bp) protein (118aa)
acriflavin resistance protein n=1 Tax=Salisaeta longa RepID=UPI0003B65C74
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AEN73874.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
qs_1_scaffold_18_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21502..23196)
DNA (1695bp) protein (565aa)
Ribonucleoside-diphosphate reductase large chain {ECO:0000313|EMBL:CBH23075.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBH23075.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
Ribonucleoside-diphosphate reductase large chain n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4X0_SALRM
nrdA; ribonucleoside-diphosphate reductase large chain
qs_1_scaffold_18_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23254..24228)
DNA (975bp) protein (325aa)
Ribonucleoside-diphosphate reductase beta subunit {ECO:0000313|EMBL:CBH23074.1}; EC=1.17.4.1 {ECO:0000313|EMBL:CBH23074.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Ince
Ribonucleoside-diphosphate reductase beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4W9_SALRM
nrdB; ribonucleoside-diphosphate reductase subunit beta
qs_1_scaffold_18_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25028..25528
DNA (501bp) protein (167aa)
FKBP-type peptidyl-prolyl cis-trans isomerase; K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] id=24658152 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915, ECO:0000313|EMBL:CBH25355.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroide
fklB; peptidyl-prolyl cis-trans isomerase
qs_1_scaffold_18_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25752..26456
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4H1_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45498.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_18_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26555..26941
DNA (387bp) protein (129aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MCS6_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47036.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_18_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26992..28290
DNA (1299bp) protein (433aa)
Serine hydroxymethyltransferase n=3 Tax=Salinibacter ruber RepID=GLYA_SALRD
glyA; Serine hydroxymethyltransferase
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBH23875.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};
qs_1_scaffold_18_25
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28526..29143
DNA (618bp) protein (206aa)
Phosphoribosyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE81_RHOMR
phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ACY47034.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qs_1_scaffold_18_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29352..30098
DNA (747bp) protein (249aa)
tatC; Sec-independent protein translocase protein TatC
tatC; Sec-independent protein translocase protein TatC; K03118 sec-independent protein translocase protein TatC id=24657651 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qs_1_scaffold_18_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30187..31863
DNA (1677bp) protein (559aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:ACY47032.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ACY47032.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
Carboxyl-terminal protease n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCS2_RHOM4
carboxyl-terminal protease
qs_1_scaffold_18_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32005..32826
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCS1_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47031.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_18_29
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32850..33068)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00036B43BC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL57339.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
qs_1_scaffold_18_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33200..33823
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4G4_SALRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC44322.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 97 in total

View Taxonomy