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qs_1_scaffold_402

Search features with annotation key words

Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_402_1
unknown

Not on your lists

comp(2..85)
DNA (84bp) protein (28aa)

This feature has no annotations

qs_1_scaffold_402_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

233..1417
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7J6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24001.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_402_3
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1507..1995)
DNA (489bp) protein (163aa)
PilT protein domain protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0S6I9_9EURY
PilT protein domain protein {ECO:0000313|EMBL:EJG06144.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis
Protein of unknown function DUF3368
qs_1_scaffold_402_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2013..3053)
DNA (1041bp) protein (347aa)
Helix-turn-helix domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKL6_RHOM4
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ACY49680.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_1_scaffold_402_trna_4
unknown

Not on your lists

comp(3957..4031)
DNA (75bp)
transferRNA
qs_1_scaffold_402_trna_3
unknown

Not on your lists

comp(4102..4168)
DNA (67bp)
transferRNA
qs_1_scaffold_402_trna_2
unknown

Not on your lists

comp(4192..4263)
DNA (72bp)
transferRNA
qs_1_scaffold_402_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


4416..4577
DNA (162bp) protein (54aa)
50S ribosomal protein L34 n=1 Tax=Salisaeta longa RepID=UPI0003B5E529
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_1_scaffold_402_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4591..7503)
DNA (2913bp) protein (971aa)
excinuclease ABC subunit A n=1 Tax=Salisaeta longa RepID=UPI0003B73FD8
uvrA; excinuclease ABC subunit A
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qs_1_scaffold_402_7
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(7643..8017)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA300-O17 RepID=UPI000374E374
hypothetical protein Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
qs_1_scaffold_402_8
unknown

Not on your lists

comp(8053..8274)
DNA (222bp) protein (74aa)

This feature has no annotations

qs_1_scaffold_402_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8536..10716
DNA (2181bp) protein (727aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBZ9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25554.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_402_10
unknown

Not on your lists

comp(10811..11419)
DNA (609bp) protein (203aa)

This feature has no annotations

qs_1_scaffold_402_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11691..13562
DNA (1872bp) protein (624aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAL6_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25071.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_402_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13730..14410
DNA (681bp) protein (227aa)
metallo-beta-lactamase superfamily protein
metallo-beta-lactamase superfamily protein id=24657864 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
UPF0173 metal-dependent hydrolase SRU_1937 {ECO:0000255|HAMAP-Rule:MF_00457}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" so
qs_1_scaffold_402_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14636..15439)
DNA (804bp) protein (268aa)
ABC transporter ATP-binding protein n=2 Tax=Salinibacter ruber RepID=D5HD80_SALRM
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CBH25985.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_1_scaffold_402_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(15484..16956)
DNA (1473bp) protein (491aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MK63_RHOM4
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACY46976.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rh
qs_1_scaffold_402_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17038..18585)
DNA (1548bp) protein (516aa)
transporter n=1 Tax=Salisaeta longa RepID=UPI0003B5FA8C
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ACY46975.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_1_scaffold_402_trna_1
unknown

Not on your lists

comp(18790..18878)
DNA (89bp)
transferRNA
qs_1_scaffold_402_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19014..19607
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGX2_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN74336.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_402_17
bacterium UASB14, Bacteria

Not on your lists

21024..21695
DNA (672bp) protein (224aa)
NmrA family protein n=1 Tax=Salisaeta longa RepID=UPI0003B6F729
Uncharacterized protein {ECO:0000313|EMBL:GAK52593.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
NmrA family transcriptional regulator
qs_1_scaffold_402_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21872..22603)
DNA (732bp) protein (244aa)
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
GMP synthase-Glutamine amidotransferase domain (EC:6.3.5.2)
GMP synthase-Glutamine amidotransferase domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EWL3_9BACT
qs_1_scaffold_402_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22952..25912
DNA (2961bp) protein (987aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711, ECO:0000313|EMBL:CBH24367.1};; Glycine cleavage system P-protein {ECO:0000256|HA
glycine dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B3C4D5
gcvP; glycine dehydrogenase
qs_1_scaffold_402_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26035..26379)
DNA (345bp) protein (115aa)
Ferredoxin n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H5D3_SALRM
fdxA; ferredoxin
Ferredoxin {ECO:0000313|EMBL:ABC45079.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain DSM
qs_1_scaffold_402_21
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26625..26816
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:CCA59216.1}; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC
qs_1_scaffold_402_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27135..27665)
DNA (531bp) protein (177aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|
GTP cyclohydrolase 1 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCY9_RHOM4
GTP cyclohydrolase I
Displaying 26 items

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