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qs_1_scaffold_140

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_140_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(557..808)
DNA (252bp) protein (84aa)
IS1 family transposase insA n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4W0_SALRD
IS1 family transposase insA
IS1 family transposase insA {ECO:0000313|EMBL:ABC44196.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_1_scaffold_140_2
unknown

Not on your lists

1661..1774
DNA (114bp) protein (38aa)

This feature has no annotations

qs_1_scaffold_140_3

Not on your lists

1853..2113
DNA (261bp) protein (87aa)
Putative uncharacterized protein {ECO:0000313|EMBL:AAU84170.1}; TaxID=285371 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos37D1.;"
qs_1_scaffold_140_4
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2110..2424
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3856F
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
hypothetical protein
qs_1_scaffold_140_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2617..5682
DNA (3066bp) protein (1022aa)
TonB-denpendent receptor n=1 Tax=Salisaeta longa RepID=UPI0003B6B3F4
Uncharacterized protein {ECO:0000313|EMBL:CBH25303.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
hypothetical protein
qs_1_scaffold_140_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5877..6101
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:AEN74408.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_140_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6113..6793
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFC6_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49382.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_140_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7098..8201)
DNA (1104bp) protein (368aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylenolpyruvoylglucosamine reductase n=2 Tax=Salinibacter ruber RepID=D5HBC4_SALRM
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
qs_1_scaffold_140_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8569..11697
DNA (3129bp) protein (1043aa)
TonB-dependent receptor n=2 Tax=Salinibacter ruber RepID=D5HBC2_SALRM
cirA; TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:CBH25327.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_140_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11866..13389
DNA (1524bp) protein (508aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B5A201
outer membrane protein
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CBH25326.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
qs_1_scaffold_140_11
unknown

Not on your lists

13564..14394
DNA (831bp) protein (277aa)

This feature has no annotations

qs_1_scaffold_140_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14591..16861
DNA (2271bp) protein (757aa)
outer membrane protein
outer membrane protein id=24658116 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:CBH25317.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
qs_1_scaffold_140_13
unknown

Not on your lists

16896..17747
DNA (852bp) protein (284aa)

This feature has no annotations

qs_1_scaffold_140_14
unknown

Not on your lists

18012..18677
DNA (666bp) protein (222aa)

This feature has no annotations

qs_1_scaffold_140_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18789..19160
DNA (372bp) protein (124aa)
Methylated-DNA/protein-cysteinemethyltransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFC5_RHOM4
methylated-DNA--protein-cysteine methyltransferase
Methylated-DNA/protein-cysteinemethyltransferase {ECO:0000313|EMBL:ACY49381.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
qs_1_scaffold_140_trna_2
unknown

Not on your lists

comp(19729..19806)
DNA (78bp)
transferRNA
qs_1_scaffold_140_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20048..21832)
DNA (1785bp) protein (595aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000255|HAMAP-Rule:MF_01659}; Short=SEPHCHC synthase {ECO:0000255|HAMAP-Rule:MF_01659};; EC=2.2.1.9 {ECO:0000255|HAMAP-Rule
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=MEND_SALRD
menD; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
qs_1_scaffold_140_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21898..23271)
DNA (1374bp) protein (458aa)
Menaquinone-specific isochorismate synthase {ECO:0000313|EMBL:CBH24465.1}; EC=5.4.4.2 {ECO:0000313|EMBL:CBH24465.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae se
isochorismate synthase n=1 Tax=Salisaeta longa RepID=UPI0003B70543
menF; menaquinone-specific isochorismate synthase
qs_1_scaffold_140_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23312..24007)
DNA (696bp) protein (232aa)
phosphoglycerate mutase n=1 Tax=Salisaeta longa RepID=UPI0003B6969E
gpm; phosphoglycerate mutase
Putative phosphoglycerate mutase {ECO:0000313|EMBL:ABC45834.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qs_1_scaffold_140_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24232..24900)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEN6_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72514.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_140_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25114..25911)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF34_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49290.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_1_scaffold_140_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26270..27238)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFF1_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47478.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_1_scaffold_140_22
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27436..28200
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WFU9_9SYNE
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61129.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
hypothetical protein
qs_1_scaffold_140_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28431..29033)
DNA (603bp) protein (201aa)
ttg2D; periplasmic efflux protein; K07323 putative toluene tolerance protein id=24658697 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ttg2D; periplasmic efflux protein
Putative periplasmic efflux protein {ECO:0000313|EMBL:CBH25882.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_1_scaffold_140_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29159..30529)
DNA (1371bp) protein (457aa)
tolC; Outer membrane protein tolC
tolC; Outer membrane protein tolC id=24658698 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Outer membrane protein tolC {ECO:0000313|EMBL:CBH25883.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_1_scaffold_140_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30905..31195
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HCX9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25884.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_140_26
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31440..32273
DNA (834bp) protein (278aa)
Putative Chromosome segregation ATPase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46V21_CUPPJ
Putative Chromosome segregation ATPase {ECO:0000313|EMBL:AAZ63013.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupr
chromosome segregation ATPase
qs_1_scaffold_140_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32406..32828
DNA (423bp) protein (141aa)
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:M
nucleoside diphosphate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B63A48
ndk; nucleoside diphosphate kinase
qs_1_scaffold_140_28
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32913..34274
DNA (1362bp) protein (454aa)
Uncharacterized conserved protein UCP016719 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFY6_RHOMR
hypothetical protein
Uncharacterized conserved protein UCP016719 {ECO:0000313|EMBL:AEN72595.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sourc
qs_1_scaffold_140_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34379..34612)
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B6124E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24196.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 35 in total

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