ggKbase home page

qs_1_scaffold_435_6

Organism: QS_1_Bacteroidetes_Order_II__Incertae_sedis_67_20

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(4560..5639)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028, ECO:0000313|EMBL:CBH24296.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 358.0
  • Bit_score: 375
  • Evalue 7.30e-101
pseudouridine synthase n=1 Tax=Salisaeta longa RepID=UPI0003B4717D similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 355.0
  • Bit_score: 389
  • Evalue 3.50e-105
rluD; ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 358.0
  • Bit_score: 375
  • Evalue 1.50e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinibacter ruber → Salinibacter → Bacteroidetes Order II. Incertae sedis → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1080
ATGAGCGACGTCGATCAACGCCGCACCGGTGACCTTATCACCTTCGAGGTACCCGCCGACTACGACGCCGGGGAGCGCCTGGACAAGTACCTCGCTGCCCGCGTGGACGCCTCGCGCACGAAGGTACAGGAGAGCATCGCCGCCGGCGCGGCCGCCGTCAACGGCGAGCAGCCCAAGAAGTCGCGTCCCGTCGAGGGGGGCGACGAAATCCGCTTGCGCCTGCTCAGGCCGCCGCCGGTGGGCGCGAAGCCGGAGGACATCCCGCTCGACGTTGCCTACGAAGACGAGCACCTGCTGGTTGTCCACAAACCGGCGGGGATGGTCGTGCACCCCGGCTACGGGCACCGCACGGGCACGCTCGTCAACGCGCTTTTGTATCACGTCGGCGCGCGGCCCATCGAGATCAGCGCGCCGTCGGACGAACTGGACGCCGGGCGCGTGGGCCTCTCGACAATCGGGGCGGTCCCGAAGCAGGAAGGCAACCCCGCCGTGCGCCCCGGTATCGTACATCGCCTCGATAAAGGAACGACAGGCCTTCTGGTCGTGGCCAAAACCAACGCGTCGCACCGGAACCTCGCGCGCCAGTTCAAGCAGCGTGCCACGCACCGCCATTACGAGGCGCTCCTCTGGGGCCGCCTTTCGCCGAAGGAGGGCACGTTCGAGGGCGCCATTGGGCGCGACCCGCGCGACCGCAAGAACATGGCCGTCGTGCCCGAGGAAAAGGGAAAGTCGGCGCGCACGCACTACCGCGCCCGTGAGCAACTCGCCCACACCGCCCGCGCGACGTTCGAGCTGGAGACGGGCCGCACGCACCAGATTCGCGTGCACGCGGCGGAGGCGGGCCACCCGCTCCTCGCCGACGCCCAGTACGGCGGCGCGCACGTCCGCAACGGCCCGCACGGGCGCAAGCGGCGCGCCTTTTTCGAGCGGCTCTTCGAGCAGCTGGGGCGCCCGGCGCTGCACGCGGCGTCGCTGGGCTTTCGCCACCCGGCCACCGGCGAGGCGATGAACTTCACCGCCGAGACGCCCGCCGACCTGCGCGCGGTCTGGGACGAACTCCGCAGGGTGGAAGGCGCGTGA
PROTEIN sequence
Length: 360
MSDVDQRRTGDLITFEVPADYDAGERLDKYLAARVDASRTKVQESIAAGAAAVNGEQPKKSRPVEGGDEIRLRLLRPPPVGAKPEDIPLDVAYEDEHLLVVHKPAGMVVHPGYGHRTGTLVNALLYHVGARPIEISAPSDELDAGRVGLSTIGAVPKQEGNPAVRPGIVHRLDKGTTGLLVVAKTNASHRNLARQFKQRATHRHYEALLWGRLSPKEGTFEGAIGRDPRDRKNMAVVPEEKGKSARTHYRAREQLAHTARATFELETGRTHQIRVHAAEAGHPLLADAQYGGAHVRNGPHGRKRRAFFERLFEQLGRPALHAASLGFRHPATGEAMNFTAETPADLRAVWDELRRVEGA*