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qs_1_scaffold_2129

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_2129_1
unknown

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comp(45..683)
DNA (639bp) protein (213aa)

This feature has no annotations

qs_1_scaffold_2129_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1041..1853
DNA (813bp) protein (271aa)
Oligoendopeptidase F n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2Z5_SALRD
pepF; oligoendopeptidase F
Oligoendopeptidase F {ECO:0000313|EMBL:ABC44446.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qs_1_scaffold_2129_3
Gloeocapsa sp. PCC 73106, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1944..2174
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B40E07
Uncharacterized protein {ECO:0000313|EMBL:ELR97217.1}; TaxID=102232 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 73106.;"
hypothetical protein
qs_1_scaffold_2129_4
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

2292..2588
DNA (297bp) protein (99aa)
Nucleotide-binding protein, PIN domain-containing protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZMQ6_ANACC
Nucleotide-binding protein, PIN domain-containing protein
Nucleotide-binding protein, PIN domain-containing protein {ECO:0000313|EMBL:AFZ60074.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica
qs_1_scaffold_2129_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2658..3173
DNA (516bp) protein (172aa)
NmrA-like family protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSZ9_HALBP
nmra-like family protein
NmrA-like family protein {ECO:0000313|EMBL:ADQ66992.1}; Nmra-like family protein {ECO:0000313|EMBL:ELY29784.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
qs_1_scaffold_2129_6
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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3341..3589
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4B614
Uncharacterized protein {ECO:0000313|EMBL:GAB61822.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
qs_1_scaffold_2129_7
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

3586..4074
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B63C93
putative nucleic acid-binding protein, contains PIN domain Tax=GWA2_Nitrospirae_42_11_curated
hypothetical protein
qs_1_scaffold_2129_8
unknown

Not on your lists

4148..4696
DNA (549bp) protein (183aa)

This feature has no annotations

qs_1_scaffold_2129_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4837..5802
DNA (966bp) protein (322aa)
ABC transporter substrate-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B733C5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45691.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_2129_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5998..7050
DNA (1053bp) protein (351aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B38A34
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
qs_1_scaffold_2129_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7297..8028
DNA (732bp) protein (244aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B5FA24
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
qs_1_scaffold_2129_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8104..8499
DNA (396bp) protein (132aa)
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M557_9FIRM
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
qs_1_scaffold_2129_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8528..9211
DNA (684bp) protein (228aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B4B278
dedA; DedA family protein
DedA family protein, putative {ECO:0000313|EMBL:ABC45367.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_1_scaffold_2129_trna_1
unknown

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9357..9429
DNA (73bp)
transferRNA
qs_1_scaffold_2129_trna_2
unknown

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9599..9680
DNA (82bp)
transferRNA
qs_1_scaffold_2129_trna_3
unknown

Not on your lists

9792..9863
DNA (72bp)
transferRNA
qs_1_scaffold_2129_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9946..11136
DNA (1191bp) protein (397aa)
elongation factor Tu n=1 Tax=Salisaeta longa RepID=UPI0003B38A18
tuf; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Orde
qs_1_scaffold_2129_trna_4
unknown

Not on your lists

11235..11307
DNA (73bp)
transferRNA
qs_1_scaffold_2129_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11358..11552
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=2 Tax=Rhodothermus marinus RepID=D0MHN5_RHOM4
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhod
qs_1_scaffold_2129_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11628..12212
DNA (585bp) protein (195aa)
Transcription termination/antitermination protein NusG n=2 Tax=Rhodothermus marinus RepID=D0MHN6_RHOM4
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
qs_1_scaffold_2129_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


12301..12741
DNA (441bp) protein (147aa)
50S ribosomal protein L11 n=1 Tax=Salisaeta longa RepID=UPI0003B6EAF6
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000313|EMBL:CBH24896.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_1_scaffold_2129_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


12845..13558
DNA (714bp) protein (238aa)
50S ribosomal protein L1 n=1 Tax=Salisaeta longa RepID=UPI0003B6709E
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_1_scaffold_2129_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


13658..14230
DNA (573bp) protein (191aa)
50S ribosomal protein L10 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHN9_RHOM4
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhod
qs_1_scaffold_2129_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


14351..14770
DNA (420bp) protein (140aa)
rplL; 50S ribosomal protein L7/L12
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 id=24659721 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L7/L12 {ECO:0000255|HAMAP-Rule:MF_00368}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qs_1_scaffold_2129_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15216..16520
DNA (1305bp) protein (435aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CB
DNA-directed RNA polymerase subunit beta n=2 Tax=Salinibacter ruber RepID=RPOB_SALRD
rpoB; DNA-directed RNA polymerase subunit beta
Displaying 25 items

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