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qs_1_scaffold_6562

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_6562_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3..617
DNA (615bp) protein (205aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=PANB_SALRD
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
qs_1_scaffold_6562_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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812..1618
DNA (807bp) protein (269aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=518766 spec
5'-nucleotidase SurE n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKC6_RHOM4
stationary-phase survival protein SurE
qs_1_scaffold_6562_3
bacterium UASB14, Bacteria

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1726..2412
DNA (687bp) protein (229aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B08
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:GAK54215.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
HAD family hydrolase
qs_1_scaffold_6562_4
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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2866..3414
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3B289
Uncharacterized protein {ECO:0000313|EMBL:CDI03665.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
hypothetical protein
qs_1_scaffold_6562_5
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3689..4063
DNA (375bp) protein (125aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z2R6_9GAMM
PIN domain protein
qs_1_scaffold_6562_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(4108..5223)
DNA (1116bp) protein (372aa)
MscS Mechanosensitive ion channel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH87_RHOM4
mechanosensitive ion channel protein MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ACY47845.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodoth
qs_1_scaffold_6562_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(5370..6224)
DNA (855bp) protein (285aa)
bifunctional protein folD (EC:3.5.4.9)
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B45B18
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_1_scaffold_6562_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6690..7646
DNA (957bp) protein (319aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448, ECO:0000313|EMBL:CBH24880.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
aspartate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B422B1
dapG; aspartate kinase
qs_1_scaffold_6562_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7898..9025
DNA (1128bp) protein (376aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:ABC46049.1}; EC=1.2.1.11 {ECO:0000313|EMBL:ABC46049.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
Aspartate-semialdehyde dehydrogenase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1I1_SALRD
asd; aspartate-semialdehyde dehydrogenase
qs_1_scaffold_6562_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9067..9714
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HAB1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24966.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_1_scaffold_6562_trna_1
unknown

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9954..10025
DNA (72bp)
transferRNA
qs_1_scaffold_6562_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10149..10946
DNA (798bp) protein (266aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales;
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARF0_RUBXD
qs_1_scaffold_6562_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

11139..11702
DNA (564bp) protein (188aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ABG06027.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ABG06027.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobac
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARF1_RUBXD
Displaying 13 items

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