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qs_1_scaffold_1079

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1079_1
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2..241)
DNA (240bp) protein (80aa)
30S ribosomal protein S7 n=1 Tax=Natronococcus occultus SP4 RepID=L0JW37_9EURY
ribosomal protein S7/S5
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4
qs_1_scaffold_1079_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(244..672)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=2 Tax=Halococcus RepID=M0MC79_9EURY
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
rps12P; 30S ribosomal protein S12
qs_1_scaffold_1079_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(869..1465)
DNA (597bp) protein (199aa)
ribC; riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] id=24646353 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
ribE; riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ERH10535.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_1_scaffold_1079_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1535..3376)
DNA (1842bp) protein (614aa)
Superfamily I DNA and RNA helicase (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZV1_9EURY
Superfamily I DNA and RNA helicase {ECO:0000313|EMBL:ERG89588.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;
uvrD; repair helicase
qs_1_scaffold_1079_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3431..3727)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JT85_HALVA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB67053.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qs_1_scaffold_1079_6
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4204..4563)
DNA (360bp) protein (120aa)
Transcriptional regulator n=4 Tax=Haloarcula RepID=G0HRI0_HALHT
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEM58320.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (stra
qs_1_scaffold_1079_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4744..5853
DNA (1110bp) protein (370aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHL3_9EURY
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:EMA44189.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
multidrug ABC transporter ATPase
qs_1_scaffold_1079_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5853..6668
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSS7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92486.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_1_scaffold_1079_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6709..7128)
DNA (420bp) protein (140aa)
thioesterase n=1 Tax=Halomicrobium katesii RepID=UPI000367839D
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACV46868.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
qs_1_scaffold_1079_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7188..8327)
DNA (1140bp) protein (380aa)
Acetyl-CoA acetyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY00_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ELZ27488.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
acetyl-CoA acetyltransferase
qs_1_scaffold_1079_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8651..9883
DNA (1233bp) protein (411aa)
tif2g; translation initiation factor IF-2 subunit gamma; K03242 translation initiation factor 2 subunit 3 id=24646227 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1085028 species="Arc
translation initiation factor 2 subunit gamma
qs_1_scaffold_1079_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10320..10703
DNA (384bp) protein (128aa)
SSU processome protein Utp24 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZV2_HALMD
SSU processome protein Utp24
SSU processome protein Utp24 {ECO:0000313|EMBL:ACV46860.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
qs_1_scaffold_1079_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


10721..11299
DNA (579bp) protein (193aa)
DNA-directed RNA polymerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZV1_HALMD
DNA-directed RNA polymerase subunit E'
DNA-directed RNA polymerase {ECO:0000313|EMBL:ACV46859.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat
qs_1_scaffold_1079_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11299..11496
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D171_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
DNA-directed RNA polymerase subunit E, RpoE2
qs_1_scaffold_1079_15
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11499..12080
DNA (582bp) protein (194aa)
UPF0218 protein C443_12281 n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KLJ4_HALAR
UPF0218 protein C443_12281 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
hypothetical protein
qs_1_scaffold_1079_16
Bacillus sp. JCM 19047, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12299..13273)
DNA (975bp) protein (325aa)
BH1811 protein n=1 Tax=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) RepID=Q9KBW3_BACHD
hypothetical protein
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:GAF23217.1}; TaxID=1460641 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. JCM 19047.
qs_1_scaffold_1079_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13479..14477)
DNA (999bp) protein (333aa)
RNA methylase; K07446 tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] id=24647374 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
N2-methylguanosine tRNA methyltransferase {ECO:0000313|EMBL:ERH08522.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
RNA methylase
qs_1_scaffold_1079_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14650..15210
DNA (561bp) protein (187aa)
TATA-box-binding protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PDU1_9EURY
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rul
TATA-box binding family protein
qs_1_scaffold_1079_19

Not on your lists

15215..16162
DNA (948bp) protein (316aa)
serA2; phosphoglycerate dehydrogenase (EC:1.1.1.95)
Phosphoglycerate dehydrogenase related dehydrogenase n=1 Tax=uncultured archaeon A07HR67 RepID=V4X8P9_9ARCH
Phosphoglycerate dehydrogenase related dehydrogenase {ECO:0000313|EMBL:ESS04124.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
qs_1_scaffold_1079_20
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16277..16549
DNA (273bp) protein (91aa)
Transcription regulator n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BI40_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ09324.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
qs_1_scaffold_1079_21
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16549..17037
DNA (489bp) protein (163aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BG94_9EURY
qs_1_scaffold_1079_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16995..18059)
DNA (1065bp) protein (355aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR10_9EURY
DNA methylase N-4/N-6 domain-containing protein
qs_1_scaffold_1079_23
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18106..18951)
DNA (846bp) protein (282aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000313|EMBL:ELZ30983.1}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=
ATP phosphoribosyltransferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D830_9EURY
ATP phosphoribosyltransferase
qs_1_scaffold_1079_24

Not on your lists

19054..20220
DNA (1167bp) protein (389aa)
Putative metal-dependent membrane protease n=1 Tax=uncultured archaeon A07HR67 RepID=V4XWQ8_9ARCH
Putative metal-dependent membrane protease {ECO:0000313|EMBL:ESS03007.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
qs_1_scaffold_1079_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20284..21450
DNA (1167bp) protein (389aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AIH4_NATGS
cytosine deaminase
qs_1_scaffold_1079_26
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21478..22119)
DNA (642bp) protein (214aa)
hypothetical protein id=24646972 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative integral membrane protein {ECO:0000313|EMBL:ERH11136.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_1079_27
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22242..23153
DNA (912bp) protein (304aa)
hypothetical protein id=24650059 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH11137.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_1079_28
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23184..24701)
DNA (1518bp) protein (506aa)
Uncharacterized protein (Fragment) n=1 Tax=halophilic archaeon J07HB67 RepID=U1PQC1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH12631.1}; Flags: Fragment;; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
qs_1_scaffold_1079_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24870..25703
DNA (834bp) protein (278aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
Adenosylhomocysteinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZW7_9EURY
S-adenosyl-L-homocysteine hydrolase
Displaying 29 items

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