ggKbase home page

qs_1_scaffold_1726

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1726_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..270
DNA (270bp) protein (90aa)
histidine triad (HIT) protein id=24646892 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase {ECO:0000313|EMBL:ERH11056.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="haloph
HIT family hydrolase
qs_1_scaffold_1726_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


653..1501
DNA (849bp) protein (283aa)
Pre-mRNA processing ribonucleoprotein, binding domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB6_HALMD
Pre-mRNA processing ribonucleoprotein, binding domain-containing protein
Pre-mRNA processing ribonucleoprotein, binding domain protein {ECO:0000313|EMBL:ACV48350.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobiu
qs_1_scaffold_1726_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1498..2124
DNA (627bp) protein (209aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00351}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00351};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobac
fibrillarin id=24644999 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
fibrillarin
qs_1_scaffold_1726_4
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2131..2337
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY41839.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
qs_1_scaffold_1726_5
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2416..3369
DNA (954bp) protein (318aa)
Uncharacterized protein {ECO:0000313|EMBL:ELY55376.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
qs_1_scaffold_1726_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3469..4011)
DNA (543bp) protein (181aa)
Uncharacterized protein id=24644953 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09168.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_1_scaffold_1726_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4518..5192)
DNA (675bp) protein (225aa)
Uncharacterized conserved protein UCP01500 n=1 Tax=Halobacterium sp. DL1 RepID=G4IHE6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03337.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qs_1_scaffold_1726_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5379..6512)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CW11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27426.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_1726_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6577..6801)
DNA (225bp) protein (75aa)
tRNA/rRNA pseudouridine synthase complex protein Gar1 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSD5_NATM8
gar1; tRNA/rRNA pseudouridine synthase complex protein Gar1
tRNA/rRNA pseudouridine synthase complex protein Gar1 {ECO:0000313|EMBL:CCQ37237.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sour
qs_1_scaffold_1726_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6798..7076)
DNA (279bp) protein (93aa)
Signal recognition particle 19 kDa protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=SRP19_NATPD
srp19; signal recognition particle 19K protein
Signal recognition particle 19 kDa protein {ECO:0000255|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000255|HAMAP-Rule:MF_00305};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
qs_1_scaffold_1726_11

Not on your lists

7137..7475
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Archaea RepID=U1Q2F5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESS08581.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
qs_1_scaffold_1726_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7514..8323)
DNA (810bp) protein (270aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CE92_9EURY
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
qs_1_scaffold_1726_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8388..9245)
DNA (858bp) protein (286aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KBW5_9EURY
qs_1_scaffold_1726_14
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9242..10549)
DNA (1308bp) protein (436aa)
trpB; tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Tryptophan synthase beta chain n=2 Tax=Haloarcula hispanica RepID=G0HXI2_HALHT
qs_1_scaffold_1726_15
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10546..11307)
DNA (762bp) protein (254aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134};; TaxID=662477 species="Archaea; Eu
Indole-3-glycerol phosphate synthase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JGN8_HALVA
indole-3-glycerol phosphate synthase
qs_1_scaffold_1726_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11467..12138)
DNA (672bp) protein (224aa)
methyltransferase type 11 id=24645846 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:ERH10064.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
methyltransferase type 11
qs_1_scaffold_1726_17
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12327..12746
DNA (420bp) protein (140aa)
Flavin-nucleotide-binding protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VYU1_9EURY
flavin-nucleotide-binding protein
Flavin-nucleotide-binding protein {ECO:0000313|EMBL:AGN02430.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Ha
qs_1_scaffold_1726_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12901..13365
DNA (465bp) protein (155aa)
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CC53_9EURY
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:ELZ20213.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
methylated-DNA--protein-cysteine methyltransferase
qs_1_scaffold_1726_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13558..13806)
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:CAI49223.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_1726_20
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13912..14652
DNA (741bp) protein (247aa)
Uncharacterized protein (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MWS4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG88423.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
conserved hypothetical protein (DUF502)
qs_1_scaffold_1726_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14698..16317
DNA (1620bp) protein (540aa)
sensor box histidine kinase (EC:2.7.13.3)
Signal transduction histidine kinase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKF5_9EURY
Signal transduction histidine kinase {ECO:0000313|EMBL:ERH10916.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_1_scaffold_1726_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16464..17177)
DNA (714bp) protein (238aa)
Homolog to cytochrome c-type biogenesis protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISJ1_NATPD
cytochrome c-type biogenesis protein
Homolog to cytochrome c-type biogenesis protein CcdA {ECO:0000313|EMBL:CAI48895.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sourc
qs_1_scaffold_1726_23
unknown

Not on your lists

comp(17257..17400)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 23 items

View Taxonomy