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qs_1_scaffold_1870

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1870_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..489
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N416_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52288.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_1_scaffold_1870_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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766..1008
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFJ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55864.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_1_scaffold_1870_3
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(954..2771)
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JTF2_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33897.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qs_1_scaffold_1870_4
unknown

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comp(3173..3289)
DNA (117bp) protein (39aa)

This feature has no annotations

qs_1_scaffold_1870_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3431..3808)
DNA (378bp) protein (126aa)
Cupin n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAB0_9EURY
Cupin {ECO:0000313|EMBL:EMA54917.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
cupin
qs_1_scaffold_1870_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3851..5122)
DNA (1272bp) protein (424aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:ERH10598.1}; EC=5.4.99.9 {ECO:0000313|EMBL:ERH10598.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
UDP-galactopyranose mutase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QTK6_9EURY
flavin-containing amine-oxidoreductase
qs_1_scaffold_1870_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5515..5703
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA34962.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
qs_1_scaffold_1870_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5750..6079
DNA (330bp) protein (110aa)
hypothetical protein id=24647637 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08771.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_1870_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6076..7212)
DNA (1137bp) protein (379aa)
gtl2; glycosyltransferase-like protein (EC:2.4.1.83); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] id=24655612 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
gtl2; glycosyltransferase-like protein (EC:2.4.1.83)
Glycosyltransferase, TIGR04182 family {ECO:0000313|EMBL:ERG89046.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
qs_1_scaffold_1870_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7318..9231
DNA (1914bp) protein (638aa)
Putative DNA helicase Rad25 {ECO:0000256|HAMAP-Rule:MF_01489}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01489};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="h
DNA or RNA helicase of superfamily II n=1 Tax=halophilic archaeon J07HX64 RepID=U1NXN2_9EURY
DNA/RNA helicase, superfamily ii
qs_1_scaffold_1870_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9312..10412
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P451_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47873.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_1_scaffold_1870_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10541..10939)
DNA (399bp) protein (133aa)
hypothetical protein id=24644204 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH08437.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_1870_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11003..11656
DNA (654bp) protein (218aa)
hypothetical protein id=24644205 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH08438.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_1870_14
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11744..11863)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DW08_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK40537.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
qs_1_scaffold_1870_15
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12052..13689)
DNA (1638bp) protein (546aa)
nrdA; ribonucleoside-diphosphate reductase alpha subunit (intein-containing) (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N8F6_9EURY
Ribonucleotide reductase {ECO:0000313|EMBL:ERG92808.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQ
Displaying 15 items

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