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qs_1_scaffold_3167

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_3167_1
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..204)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W6W7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY45245.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
qs_1_scaffold_3167_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(280..2082)
DNA (1803bp) protein (601aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
Putative tRNA(Met) cytidine acetyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CSJ6_9EURY
p-loop ATPase fused to an acetyltransferase
qs_1_scaffold_3167_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2049..2441)
DNA (393bp) protein (131aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacterial
p-loop ATPase fused to an acetyltransferase id=24646435 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
bifunctional P-loop ATPase/acetyltransferase
qs_1_scaffold_3167_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2574..3554)
DNA (981bp) protein (327aa)
diphosphomevalonate decarboxylase n=1 Tax=Halomicrobium katesii RepID=UPI00035DDDD0
diphosphomevalonate decarboxylase
Diphosphomevalonate decarboxylase {ECO:0000313|EMBL:ACV48241.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium m
qs_1_scaffold_3167_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3974..5344)
DNA (1371bp) protein (457aa)
NADH-ubiquinone oxidoreductase chain N (EC:1.6.5.3)
NADH dehydrogenase-oxidoreductase protein {ECO:0000313|EMBL:ERJ07126.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ERJ07126.1};; NADH-ubiquinone oxidoreductase chain N {ECO:0000313|EMBL:CCQ32747.1}; EC=1.6.5.3 {EC
NADH dehydrogenase-oxidoreductase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP79_9EURY
qs_1_scaffold_3167_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5344..6912)
DNA (1569bp) protein (523aa)
NADH-ubiquinone oxidoreductase chain M (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase chain M {ECO:0000313|EMBL:CCQ32748.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CCQ32748.1};; NADHubiquinone oxidoreductase subunit 4 Energy production protein {ECO:0000313|EMBL:ERJ
NADH-ubiquinone oxidoreductase chain M n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP78_9EURY
qs_1_scaffold_3167_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6913..8865)
DNA (1953bp) protein (651aa)
NADH-ubiquinone oxidoreductase chain L (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase chain L {ECO:0000313|EMBL:CCQ32749.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CCQ32749.1};; NADHubiquinone oxidoreductase subunit 5-Multisubunit Na+-H+ antiporter protein {ECO:000
NADH-ubiquinone oxidoreductase chain L n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP77_9EURY
qs_1_scaffold_3167_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8867..9172)
DNA (306bp) protein (102aa)
NADH-ubiquinone oxidoreductase chain 4L n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CDZ8_9EURY
NADH-ubiquinone oxidoreductase chain 4L {ECO:0000313|EMBL:ELZ20577.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
NADH-quinone oxidoreductase subunit K
qs_1_scaffold_3167_9
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9172..9507)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0BE82_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ09201.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
hypothetical protein
qs_1_scaffold_3167_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9504..9767)
DNA (264bp) protein (88aa)
NADH dehydrogenase subunit J {ECO:0000313|EMBL:EMA50894.1}; EC=1.6.5.3 {ECO:0000313|EMBL:EMA50894.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
NADH-ubiquinone oxidoreductase chain J (EC:1.6.5.3)
NADH dehydrogenase subunit J n=2 Tax=Halococcus RepID=M0N1B2_9EURY
qs_1_scaffold_3167_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10013..11122
DNA (1110bp) protein (370aa)
geranylgeranyl reductase id=24644143 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Geranylgeranyl reductase family {ECO:0000313|EMBL:ERH08375.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
geranylgeranyl reductase
qs_1_scaffold_3167_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11366..12073)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25057.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_3167_13
unknown

Not on your lists

12201..12629
DNA (429bp) protein (143aa)

This feature has no annotations

qs_1_scaffold_3167_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12891..13421)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J649_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15767.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_1_scaffold_3167_15
Gordonia paraffinivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13677..14753)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Gordonia paraffinivorans NBRC 108238 RepID=M3VIR3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:GAC84174.1}; TaxID=1223543 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia paraffinivorans NBRC 108238.;"
hypothetical protein
qs_1_scaffold_3167_16
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14839..15495)
DNA (657bp) protein (219aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496, ECO:0000313|EMBL:ELZ65847.1}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1227462 speci
Isopentenyl phosphate kinase n=3 Tax=Haloferax RepID=M0F491_9EURY
aspartate/glutamate/uridylate kinase
qs_1_scaffold_3167_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15497..16480)
DNA (984bp) protein (328aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=48
Mevalonate kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ21_HALMD
mevalonate kinase
qs_1_scaffold_3167_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16574..16993
DNA (420bp) protein (140aa)
Cobalamin B12-binding domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRC2_9EURY
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:EFW92541.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
methylmalonyl-CoA mutase
qs_1_scaffold_3167_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16998..18125
DNA (1128bp) protein (376aa)
ArgK-type transport ATPase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQZ7_NATPD
argK; transport ATPase, component for LAO/AO transport systems
YgfD family GTPase {ECO:0000313|EMBL:CAI49447.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
qs_1_scaffold_3167_20
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18237..19172
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JW97_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA11915.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
qs_1_scaffold_3167_21
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19461..19925)
DNA (465bp) protein (155aa)
Transcription elongation factor NusA n=3 Tax=Haloarcula RepID=V5TRC4_HALHI
transcription elongation factor NusA
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source=
qs_1_scaffold_3167_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19999..21048)
DNA (1050bp) protein (350aa)
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6) id=24646169 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase, beta' subunit/160 kD subunit {ECO:0000313|EMBL:ERH10348.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
qs_1_scaffold_3167_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22123..22389)
DNA (267bp) protein (89aa)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
DNA-directed RNA polymerase subunit A'' n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYI5_HALMD
DNA-directed RNA polymerase subunit A''
qs_1_scaffold_3167_24
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22389..24491)
DNA (2103bp) protein (701aa)
rpoA'; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=24649256 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="haloph
DNA-directed RNA polymerase subunit A'
Displaying 24 items

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