ggKbase home page

qs_1_scaffold_409

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_409_1
Leptolyngbya sp. Heron Island J, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(2..406)
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00030587F1
Major facilitator superfamily protein {ECO:0000313|EMBL:ESA37907.1}; TaxID=1385935 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. He
major facilitator superfamily protein
qs_1_scaffold_409_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

781..1812
DNA (1032bp) protein (344aa)
hypothetical protein id=24644853 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09066.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_409_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1904..4597)
DNA (2694bp) protein (898aa)
leucyl-tRNA synthetase (EC:6.1.1.9)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=797210 species="Archaea; Euryarch
Leucyl-tRNA synthetase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCQ7_HALXS
qs_1_scaffold_409_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5156..5842
DNA (687bp) protein (229aa)
CDP-alcohol phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8] id=24654682 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Phosphatidylserine synthase {ECO:0000313|EMBL:ERG89650.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
CDP-alcohol phosphatidyltransferase
qs_1_scaffold_409_5
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6086..7144)
DNA (1059bp) protein (353aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KRM1_9EURY
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:EMA22854.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylo
cbiA1; cobyrinic acid ac-diamide synthase
qs_1_scaffold_409_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7141..9243)
DNA (2103bp) protein (701aa)
Acetyl CoA synthetase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKH6_9EURY
Acetyl CoA synthetase {ECO:0000313|EMBL:ELZ23746.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
acetyl CoA synthetase
qs_1_scaffold_409_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9396..10217
DNA (822bp) protein (274aa)
serine/threonine protein kinase involved in cell cycle control id=24646279 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Serine/threonine protein kinase involved in cell cycle control {ECO:0000313|EMBL:ERH10461.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeo
hypothetical protein
qs_1_scaffold_409_8
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10421..10921)
DNA (501bp) protein (167aa)
Halocyanin domain protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NYB5_9EURY
Halocyanin domain protein {ECO:0000313|EMBL:EMA62922.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21
hcp_1; halocyanin 1
qs_1_scaffold_409_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11188..11388
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J0Z1_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01390.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_1_scaffold_409_10
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11446..12243)
DNA (798bp) protein (266aa)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P493_HALMD
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KKF39672.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovo
orotidine 5'-phosphate decarboxylase
qs_1_scaffold_409_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12298..12699)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLC0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23167.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_409_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12701..13144)
DNA (444bp) protein (148aa)
hypothetical protein id=24645283 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09500.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_409_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13230..13601
DNA (372bp) protein (124aa)
rps8R; 30S ribosomal protein S8e; K02995 small subunit ribosomal protein S8e id=24648199 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
rps8R; 30S ribosomal protein S8e
qs_1_scaffold_409_14
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13598..14596)
DNA (999bp) protein (333aa)
prp1; phosphate regulatory protein-like id=24645112 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Phosphate uptake regulator {ECO:0000313|EMBL:ERH09333.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
prp1; phosphate regulatory protein-like
qs_1_scaffold_409_15
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14812..15993
DNA (1182bp) protein (394aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] id=24648997 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Xaa-pro aminopeptidase {ECO:0000313|EMBL:ERH10132.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
peptidase M24
qs_1_scaffold_409_16
unknown

Not on your lists

16105..16347
DNA (243bp) protein (81aa)

This feature has no annotations

qs_1_scaffold_409_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16409..16819)
DNA (411bp) protein (137aa)
hypothetical protein id=24647350 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH08496.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_409_18
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16932..17477
DNA (546bp) protein (182aa)
Adenylate kinase n=2 Tax=Haloarcula hispanica RepID=G0HT18_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF26021.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_1_scaffold_409_19
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17474..17887
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NU12_HALUD
hypothetical protein
UPF0201 protein Huta_2090 {ECO:0000256|HAMAP-Rule:MF_01112}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
qs_1_scaffold_409_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18023..18763
DNA (741bp) protein (247aa)
hypothetical protein id=24648803 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09936.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_409_21
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18845..19195
DNA (351bp) protein (117aa)
Transcription repressor CinR n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M289_9EURY
Transcription repressor CinR {ECO:0000313|EMBL:EMA38719.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens
transcription repressor CinR
qs_1_scaffold_409_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19278..20273
DNA (996bp) protein (332aa)
hypothetical protein id=24648121 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09248.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_409_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20296..21948)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZZ76_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58333.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
glycyl aminopeptidase
qs_1_scaffold_409_24
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22060..23709
DNA (1650bp) protein (550aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7R0_HALJP
DNA ligase
qs_1_scaffold_409_25
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24017..24472
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EKC3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ48195.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
qs_1_scaffold_409_26
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24469..24906)
DNA (438bp) protein (146aa)
Acyl-CoA thioester hydrolase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LC87_HALJP
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:EMA29560.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DS
acyl-CoA thioester hydrolase
qs_1_scaffold_409_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25053..26915
DNA (1863bp) protein (621aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWB7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26943.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_409_28
unknown

Not on your lists

26932..27162
DNA (231bp) protein (77aa)

This feature has no annotations

qs_1_scaffold_409_29
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27343..29187)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1NW30_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH08285.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ATPase-like protein
qs_1_scaffold_409_30
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29308..29646
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PG50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09064.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
Displaying items 1-30 of 38 in total

View Taxonomy