ggKbase home page

qs_1_scaffold_490

Search features with annotation key words

Displaying items 1-30 of 52 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_490_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..311)
DNA (309bp) protein (103aa)
transcription initiation factor IIB 2 n=1 Tax=Halomicrobium katesii RepID=UPI000363CB49
transcription initiation factor IIB 2
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
qs_1_scaffold_490_2
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(617..2431)
DNA (1815bp) protein (605aa)
Dolichol-P-glucose synthetase n=2 Tax=Haloarcula hispanica RepID=G0HXH3_HALHT
glycosyl transferase
Glycosyl transferase {ECO:0000313|EMBL:AJF25024.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_1_scaffold_490_3
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2559..3761)
DNA (1203bp) protein (401aa)
Pyrrolo-quinoline quinone n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZXI0_9EURY
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELY89858.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.
qs_1_scaffold_490_4
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3894..4262)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IFN3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05377.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
Zn-dependent oxidoreductase, NADPH:quinone reductase
qs_1_scaffold_490_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4485..6917
DNA (2433bp) protein (811aa)
Peptidase S45 penicillin amidase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N696_9EURY
Peptidase S45 penicillin amidase {ECO:0000313|EMBL:EMA52644.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
peptidase S45 penicillin amidase
qs_1_scaffold_490_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6943..7284
DNA (342bp) protein (114aa)
hypothetical protein id=24649631 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH10720.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_490_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7331..7897)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBD6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20591.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_490_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7983..8177)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003623F1A
UPF0434 protein HALDL1_10860 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp
hypothetical protein
qs_1_scaffold_490_9
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8310..9704)
DNA (1395bp) protein (465aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LV13_9EURY
adenylosuccinate synthase
qs_1_scaffold_490_10
unknown

Not on your lists

comp(9704..9928)
DNA (225bp) protein (75aa)

This feature has no annotations

qs_1_scaffold_490_11
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10048..10353
DNA (306bp) protein (102aa)
Uncharacterized protein n=9 Tax=Haloarcula RepID=G0HUM5_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA18731.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
qs_1_scaffold_490_12
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10355..12667)
DNA (2313bp) protein (771aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMB1_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09109.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_1_scaffold_490_13
unknown

Not on your lists

comp(12725..12943)
DNA (219bp) protein (73aa)

This feature has no annotations

qs_1_scaffold_490_14
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13210..14124)
DNA (915bp) protein (305aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
methylmalonyl-CoA mutase n=1 Tax=Halomicrobium katesii RepID=UPI000378AD90
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:ELZ47533.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum cori
qs_1_scaffold_490_15
unknown

Not on your lists

14526..15269
DNA (744bp) protein (248aa)

This feature has no annotations

qs_1_scaffold_490_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15289..16086)
DNA (798bp) protein (266aa)
CBS domain-containing IMP dehydrogenase/putative signal transduction protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CGL3_9EURY
CBS domain-containing IMP dehydrogenase/putative signal transduction protein {ECO:0000313|EMBL:ELZ21773.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
signal transduction protein with CBS domains
qs_1_scaffold_490_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16125..17789)
DNA (1665bp) protein (555aa)
Phosphoesterase RecJ domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWR6_HALMD
phosphoesterase RecJ domain-containing protein
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:ACV48276.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
qs_1_scaffold_490_18
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17862..18290)
DNA (429bp) protein (143aa)
HTH-type transcriptional regulator Ptr2 n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YUB6_9EURY
HTH-type transcriptional regulator Ptr2 {ECO:0000313|EMBL:GAD52312.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
Lrp/AsnC family transcription regulator
qs_1_scaffold_490_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18422..19360)
DNA (939bp) protein (313aa)
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family n=1 Tax=halophilic archaeon J07HX64 RepID=U1PJP4_9EURY
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family {ECO:0000313|EMBL:ERH10691.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
qs_1_scaffold_490_20
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19357..21177)
DNA (1821bp) protein (607aa)
korA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
Pyruvate:ferredoxin oxidoreductase related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit n=1 Tax=halophilic archaeon J07HX64 RepID=U1QXN8_9EURY
Pyruvate:ferredoxin oxidoreductase related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit {ECO:0000313|EMBL:ERH10692.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
qs_1_scaffold_490_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21361..22596)
DNA (1236bp) protein (412aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWR0_HALMD
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:ACV48270.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
qs_1_scaffold_490_22
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22743..23786
DNA (1044bp) protein (348aa)
fdfT; farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
Farnesyl-diphosphate farnesyltransferase {ECO:0000313|EMBL:AAV46402.1}; EC=2.5.1.21 {ECO:0000313|EMBL:AAV46402.1};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Farnesyl-diphosphate farnesyltransferase n=3 Tax=Haloarcula RepID=Q5V250_HALMA
qs_1_scaffold_490_23
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23885..25363
DNA (1479bp) protein (493aa)
aspartyl-tRNA(Asn) amidotransferase subunit B / alutamyl-tRNA(Gln) amidotransferase subunit B (EC:6.3.5.- 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNB6_9EURY
qs_1_scaffold_490_24
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25395..26267
DNA (873bp) protein (291aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IZ13_HALVA
Methyltransferase {ECO:0000313|EMBL:EMA00690.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715
qs_1_scaffold_490_25
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26364..27410)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KFH8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA19613.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
qs_1_scaffold_490_26
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27491..31585
DNA (4095bp) protein (1365aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1227494 species="Archaea; Euryarchae
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZVI9_9EURY
qs_1_scaffold_490_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31708..32175
DNA (468bp) protein (156aa)
Transposase ISHwa16_A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCX3_9EURY
Transposase ISHwa16_A {ECO:0000313|EMBL:EMA54939.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
ISSod10-type transposase ISHwa16
qs_1_scaffold_490_28
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32406..33446
DNA (1041bp) protein (347aa)
Oxidoreductase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JT51_HALVA
tas; oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:EMA11528.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
qs_1_scaffold_490_29
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33486..35429)
DNA (1944bp) protein (648aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWG3_HALBP
Chromosome segregation protein (Spc25, Csm1, Pcs1)
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:ADQ69383.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
qs_1_scaffold_490_30
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(35552..36163)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IIM9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG02950.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
Displaying items 1-30 of 52 in total

View Taxonomy