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qs_1_scaffold_689

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_689_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..1320)
DNA (1320bp) protein (440aa)
fadD1; long-chain fatty-acid-CoA ligase id=24647486 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:ERH08625.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX6
acyl-CoA synthetase
qs_1_scaffold_689_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1366..2169
DNA (804bp) protein (268aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPD1_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:ELZ24257.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" sour
DNA-binding protein
qs_1_scaffold_689_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2270..3769
DNA (1500bp) protein (500aa)
branched chain amino acid ABC transporter branched chain amino acid-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein id=24647487 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Amino acid/amide ABC transporter substrate-binding protein, HAAT family {ECO:0000313|EMBL:ERH08626.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
branched chain amino acid ABC transporter branched chain amino acid-binding protein
qs_1_scaffold_689_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3791..4600
DNA (810bp) protein (270aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQU1_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ24259.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC transporter
qs_1_scaffold_689_5
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4620..5318
DNA (699bp) protein (233aa)
ABC transporter-like protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K303_9EURY
ABC transporter
ABC transporter-like protein {ECO:0000313|EMBL:EMA14250.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae
qs_1_scaffold_689_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5315..6340
DNA (1026bp) protein (342aa)
id=24654329 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERG88600.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
amino acid/amide ABC transporter membrane protein 1, haat family
qs_1_scaffold_689_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6337..7785
DNA (1449bp) protein (483aa)
Amino acid/amide ABC transporter membrane protein 2, HAAT family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTK7_HALBP
amino acid/amide ABC transporter membrane protein 2, haat family
Amino acid/amide ABC transporter membrane protein 2, HAAT family {ECO:0000313|EMBL:ADQ67059.1}; Amino acid/amide ABC transporter membrane protein 2, haat family {ECO:0000313|EMBL:ELY29606.1}; TaxID=46
qs_1_scaffold_689_8
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7838..8647)
DNA (810bp) protein (270aa)
nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) (EC:2.4.2.19) rbh
Nicotinate-nucleotide pyrophosphorylase [carboxylating] {ECO:0000256|PIRNR:PIRNR006250}; EC=2.4.2.19 {ECO:0000256|PIRNR:PIRNR006250, ECO:0000313|EMBL:CAP14374.1};; Quinolinate phosphoribosyltransferas
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Halobacterium salinarum RepID=B0R6K5_HALS3
qs_1_scaffold_689_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8650..10275)
DNA (1626bp) protein (542aa)
nadB; L-aspartate oxidase (EC:1.4.3.16); K00278 L-aspartate oxidase [EC:1.4.3.16] id=24645840 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
L-aspartate oxidase {ECO:0000313|EMBL:ERH10059.1}; EC=1.4.3.16 {ECO:0000313|EMBL:ERH10059.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archae
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
qs_1_scaffold_689_10
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10278..11396)
DNA (1119bp) protein (373aa)
quinolinate synthetase; K03517 quinolinate synthase [EC:2.5.1.72] id=24645841 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halo
Quinolinate synthase A (EC:2.5.1.72)
qs_1_scaffold_689_11
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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11772..12065
DNA (294bp) protein (98aa)
DNA polymerase beta domain-containing protein; K07075 Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
DNA polymerase beta domain protein region id=2167798 bin=GWB2_Nitrospirae_rel_47_37 species=Archaeoglobus veneficus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
nucleotidyltransferase
qs_1_scaffold_689_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12062..12415
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LMA3_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC41223.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
qs_1_scaffold_689_13
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12419..13984)
DNA (1566bp) protein (522aa)
hypothetical protein id=24647956 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative metal-dependent hydrolase {ECO:0000313|EMBL:ERH09083.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
tim-barrel fold metal-dependent hydrolase
Displaying 13 items

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