ggKbase home page

qs_1_scaffold_7001

Search features with annotation key words

Displaying 9 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_7001_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..576
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4B9_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47941.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_1_scaffold_7001_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


583..1209
DNA (627bp) protein (209aa)
50S ribosomal protein L3 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMP0_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
rpl3p; 50S ribosomal protein L3P
qs_1_scaffold_7001_3
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1265..1513
DNA (249bp) protein (83aa)
50S ribosomal protein L3 n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H3I2_9EURY
Suspect SCG annotation. See neighboring gene [qs_1_scaffold_7001_2].
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sour
50S ribosomal protein L3
qs_1_scaffold_7001_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


1517..2257
DNA (741bp) protein (247aa)
50S ribosomal protein L4 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QYC9_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
50S ribosomal protein L4
qs_1_scaffold_7001_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2257..2511
DNA (255bp) protein (85aa)
50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=24646813 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
rplW; 50S ribosomal protein L23
qs_1_scaffold_7001_6
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


2514..3236
DNA (723bp) protein (241aa)
50S ribosomal protein L2 n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WY13_9EURY
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" so
rpl2p; 50S ribosomal protein L2
qs_1_scaffold_7001_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3233..3655
DNA (423bp) protein (141aa)
30S ribosomal protein S19 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS19_NATPD
rps19p; 30S ribosomal protein S19P
30S ribosomal protein S19 {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_1_scaffold_7001_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3658..4119
DNA (462bp) protein (154aa)
50S ribosomal protein L22 n=1 Tax=Halomicrobium katesii RepID=UPI000361BABD
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium
qs_1_scaffold_7001_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


4119..4373
DNA (255bp) protein (85aa)
30S ribosomal protein S3 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4C6_HALMD
rps3p; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
Displaying 9 items

View Taxonomy