ggKbase home page

qs_1_scaffold_5191

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_5191_1
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..1863
DNA (1863bp) protein (621aa)
cas3A; CRISPR-associated helicase Cas3 (EC:3.6.4.-)
CRISPR-associated helicase Cas3 n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A7F6_9EURY
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:GAD53619.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
qs_1_scaffold_5191_2
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1860..2468
DNA (609bp) protein (203aa)
CRISPR-associated protein Cas4 n=2 Tax=Haloferax RepID=M0IG87_9EURY
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:ELZ94459.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus JC
CRISPR-associated protein Cas4
qs_1_scaffold_5191_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2465..3469
DNA (1005bp) protein (335aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
CRISPR-associated endonuclease Cas1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ69_NATPD
hypothetical protein
qs_1_scaffold_5191_4
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3471..3743
DNA (273bp) protein (91aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Hal
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LX95_HALLT
CRISPR-associated protein Cas2
qs_1_scaffold_5191_5
unknown

Not on your lists

5077..5322
DNA (246bp) protein (82aa)

This feature has no annotations

qs_1_scaffold_5191_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5675..6457)
DNA (783bp) protein (261aa)
NAD operon protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMN4_9EURY
NAD operon protein {ECO:0000313|EMBL:ELZ23662.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;
hypothetical protein
qs_1_scaffold_5191_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6549..7481)
DNA (933bp) protein (311aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRG6_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ24977.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC transporter
qs_1_scaffold_5191_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7607..8404
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1PJL8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10661.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_1_scaffold_5191_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9103..10713)
DNA (1611bp) protein (537aa)
DEAD/DEAH box helicase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSY7_9EURY
DEAD/DEAH box helicase {ECO:0000313|EMBL:ELZ24979.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
DEAD/DEAH box helicase
qs_1_scaffold_5191_10
uncultured_archaeon_J07HX5, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10965..11822
DNA (858bp) protein (286aa)
id=24654713 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
Displaying 10 items

View Taxonomy