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qs_1_scaffold_4047

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_4047_1
unknown

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3..101
DNA (99bp) protein (33aa)

This feature has no annotations

qs_1_scaffold_4047_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(464..1384)
DNA (921bp) protein (307aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00304}; TaxI
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBR4_9EURY
ribulose-1,5-biphosphate synthetase
qs_1_scaffold_4047_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1463..1630)
DNA (168bp) protein (56aa)
CheC, inhibitor of MCP methylation {ECO:0000313|EMBL:ACV47049.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
qs_1_scaffold_4047_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1599..2111)
DNA (513bp) protein (171aa)
Chemotaxis protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PLY5_9EURY
cheC; chemotaxis protein CheC--inhibitor of MCP methylation
Chemotaxis protein {ECO:0000313|EMBL:ERJ06405.1}; Chemotaxis protein CheC--inhibitor of MCP methylation {ECO:0000313|EMBL:CCQ34575.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halo
qs_1_scaffold_4047_5
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2243..3001)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HS52_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ86578.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
qs_1_scaffold_4047_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3160..3852)
DNA (693bp) protein (231aa)
Type 11 methyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8B3_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:EMA54096.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis
methyltransferase type 11
qs_1_scaffold_4047_7
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3905..4324)
DNA (420bp) protein (140aa)
DNA-binding protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCA2_HALAR
DNA-binding protein {ECO:0000313|EMBL:EMA18846.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12
DNA-binding protein
qs_1_scaffold_4047_8
unknown

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comp(4641..4742)
DNA (102bp) protein (34aa)

This feature has no annotations

qs_1_scaffold_4047_9
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4739..6757)
DNA (2019bp) protein (673aa)
Deoxycytidine triphosphate deaminase n=1 Tax=Natronococcus occultus SP4 RepID=L0JX05_9EURY
deoxycytidine triphosphate deaminase
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:AGB36383.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occu
qs_1_scaffold_4047_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6869..7207
DNA (339bp) protein (113aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00628}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00628};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00628};; TaxID=1132509 species="Archaea; Euryarchaeota;
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSL0_9EURY
qs_1_scaffold_4047_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7326..8063
DNA (738bp) protein (246aa)
proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
proteasome subunit alpha n=1 Tax=Halomicrobium katesii RepID=UPI0003790118
qs_1_scaffold_4047_12
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8056..8769
DNA (714bp) protein (238aa)
Proteasome endopeptidase complex (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
Proteasome subunit beta n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=PSB_HALUD
qs_1_scaffold_4047_13
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8913..9641
DNA (729bp) protein (243aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K6M9_9EURY
Displaying 13 items

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