ggKbase home page

qs_1_scaffold_4644

Search features with annotation key words

Displaying 11 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_4644_1

Not on your lists

3..155
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XRU7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS02786.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
qs_1_scaffold_4644_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(246..989)
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp n=1 Tax=halophilic archaeon J07HX64 RepID=U1QTB0_9EURY
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1085028 species="Arch
Proliferating cell nuclear antigen, PCNA
qs_1_scaffold_4644_3

Not on your lists

comp(971..1339)
DNA (369bp) protein (123aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Dihydrolipoyl dehydrogenase n=2 Tax=Archaea RepID=B9LWE8_HALLT
qs_1_scaffold_4644_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1644..2456
DNA (813bp) protein (271aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D0H4_9EURY
ribosomal RNA methyltransferase RrmJ/FtsJ rbh
qs_1_scaffold_4644_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2471..3265)
DNA (795bp) protein (265aa)
Putative ACR protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ64_9EURY
putative transporter
Putative ACR protein {ECO:0000313|EMBL:ERJ06832.1}; Putative transporter {ECO:0000313|EMBL:CCQ33031.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
qs_1_scaffold_4644_6
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3258..3431)
DNA (174bp) protein (58aa)
Putative transcriptional regulator, CopG/Arc/MetJ family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1B6_HALMD
CopG family transcriptional regulator
Putative CopG/Arc/MetJ family transcriptional regulator {ECO:0000313|EMBL:ELY34161.1}; Putative transcriptional regulator, CopG/Arc/MetJ family protein {ECO:0000313|EMBL:ADJ13793.1}; TaxID=795797 spec
qs_1_scaffold_4644_7
unknown

Not on your lists

comp(4064..4948)
DNA (885bp) protein (295aa)

This feature has no annotations

qs_1_scaffold_4644_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4977..5483
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IG47_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04519.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
qs_1_scaffold_4644_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5534..5806
DNA (273bp) protein (91aa)
gyd domain id=24614699 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Gyd domain {ECO:0000313|EMBL:ESP88847.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrellen
gyd domain
qs_1_scaffold_4644_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6315..8492)
DNA (2178bp) protein (726aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1B7_HALMD
Sec-independent periplasmic protein translocase
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:ACV47125.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="H
qs_1_scaffold_4644_11
Aspergillus niger, Aspergillus, Eurotiales, Eurotiomycetidae, Ascomycota, Fungi

Not on your lists

8593..9102
DNA (510bp) protein (170aa)
Uncharacterized protein n=2 Tax=Aspergillus niger RepID=G3XS90_ASPNA
Uncharacterized protein {ECO:0000313|EMBL:EHA27156.1}; TaxID=380704 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Asperg
hypothetical protein
Displaying 11 items

View Taxonomy