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qs_1_scaffold_1202

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1202_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..370
DNA (369bp) protein (123aa)
Nuclease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M8C1_9EURY
Nuclease {ECO:0000313|EMBL:EMA41976.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
qs_1_scaffold_1202_2
unknown

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comp(466..1044)
DNA (579bp) protein (193aa)

This feature has no annotations

qs_1_scaffold_1202_trna_1
unknown

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comp(1333..1405)
DNA (73bp)
transferRNA
qs_1_scaffold_1202_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1430..1999
DNA (570bp) protein (190aa)
IMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00705}; EC=3.5.4.10 {ECO:0000256|HAMAP-Rule:MF_00705};; IMP synthase {ECO:0000256|HAMAP-Rule:MF_00705}; Inosinicase {ECO:0000256|HAMAP-Rule:MF_00705}; Tax
IMP cyclohydrolase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4I2_9EURY
IMP cyclohydrolase
qs_1_scaffold_1202_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2132..2485
DNA (354bp) protein (118aa)
Serine/threonine protein phosphatase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4N5_9EURY
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EMA52851.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
phosphodiesterase, MJ0936 family
qs_1_scaffold_1202_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2455..2733
DNA (279bp) protein (93aa)
Serine/threonine protein phosphatase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4N5_9EURY
Serine/threonine protein phosphatase {ECO:0000313|EMBL:EMA52851.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
phosphodiesterase
qs_1_scaffold_1202_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2796..3974)
DNA (1179bp) protein (393aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M575_9EURY
qs_1_scaffold_1202_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4302..4709
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42686.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_1_scaffold_1202_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4803..5432)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBW5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55048.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_1_scaffold_1202_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5595..5750
DNA (156bp) protein (52aa)
Small CPxCG-related zinc finger protein n=2 Tax=Halococcus RepID=M0MS26_9EURY
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:EMA52685.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
hypothetical protein
qs_1_scaffold_1202_10
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6566..7714
DNA (1149bp) protein (383aa)
ABC transporter substrate-binding protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GZP4_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ76977.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lars
ThiB subfamily ABC transporter periplasmic binding protein
qs_1_scaffold_1202_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7871..9742
DNA (1872bp) protein (624aa)
ABC transporter n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CP59_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ23664.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
ABC transporter
qs_1_scaffold_1202_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9744..10913
DNA (1170bp) protein (390aa)
ABC transporter n=1 Tax=Halogranum salarium B-1 RepID=J3A3H7_9EURY
ABC transporter {ECO:0000313|EMBL:EJN59943.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
ABC transporter
qs_1_scaffold_1202_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11013..11693)
DNA (681bp) protein (227aa)
probable S-adenosylmethionine-dependent methyltransferase (homolog to 24-sterol C-methyltransferase) (EC:2.1.1.-)
S-adenosylmethionine-dependent methyltransferase 3 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M593_9EURY
S-adenosylmethionine-dependent methyltransferase 3 {ECO:0000313|EMBL:EMA40977.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
qs_1_scaffold_1202_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12219..13094
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42754.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_1_scaffold_1202_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13249..14040)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MG40_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44323.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_1_scaffold_1202_16
unknown

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comp(14040..14129)
DNA (90bp) protein (30aa)

This feature has no annotations

qs_1_scaffold_1202_17
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14234..14830)
DNA (597bp) protein (199aa)
DNA damage-inducible protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PNX5_9EURY
MATE efflux family protein
DNA damage-inducible protein {ECO:0000313|EMBL:ERJ05362.1}; MATE efflux family protein {ECO:0000313|EMBL:CCQ33632.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_1_scaffold_1202_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14830..15666)
DNA (837bp) protein (279aa)
Efflux protein, mate family n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR59_9EURY
Efflux protein, mate family {ECO:0000313|EMBL:EMA47848.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
efflux protein, mate family
qs_1_scaffold_1202_19
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15836..16957)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XVW7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY65551.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
qs_1_scaffold_1202_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16962..17390)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42693.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_1_scaffold_1202_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17394..18026)
DNA (633bp) protein (211aa)
GTP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MA72_9EURY
GTP-binding protein {ECO:0000313|EMBL:EMA42692.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
small GTP-binding protein domain
qs_1_scaffold_1202_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18854..20668
DNA (1815bp) protein (605aa)
ORC1-type DNA replication protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1F2_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
cdc6_1; cell division control protein cdc6-like protein
qs_1_scaffold_1202_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20865..21653
DNA (789bp) protein (263aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2X8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA39758.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
qs_1_scaffold_1202_24
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21878..22594)
DNA (717bp) protein (239aa)
Signal peptidase I n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ACT1_9EURY
Signal peptidase I {ECO:0000313|EMBL:GAD52583.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sec11a; signal sequence peptidase
qs_1_scaffold_1202_25
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23629..24267
DNA (639bp) protein (213aa)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=1114856 species="Archaea; Eurya
polD1; DNA-directed DNA polymerase D exonuclease subunit DP1 (EC:2.7.7.7)
DNA polymerase II small subunit n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VFW2_9EURY
qs_1_scaffold_1202_26
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24579..25232)
DNA (654bp) protein (218aa)
Trk potassium uptake system protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0ECK7_9EURY
Trk potassium uptake system protein {ECO:0000313|EMBL:ELZ44788.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californ
K+ transport system, NAD-binding component
Displaying 27 items

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