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qs_1_scaffold_1596

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1596_1
unknown

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comp(3..332)
DNA (330bp) protein (110aa)

This feature has no annotations

qs_1_scaffold_1596_2
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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511..1311
DNA (801bp) protein (267aa)
MutT/NUDIX family protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3F6_HALMT
mutT; mutT/NUDIX family protein
MutT/NUDIX family protein {ECO:0000313|EMBL:AFK18766.1}; NUDIX hydrolase {ECO:0000313|EMBL:AHZ21865.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
qs_1_scaffold_1596_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1403..2206
DNA (804bp) protein (268aa)
pheA; prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:CCQ37959.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CCQ37959.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Prephenate dehydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTY1_NATM8
qs_1_scaffold_1596_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2282..3136)
DNA (855bp) protein (285aa)
Zinc/iron permease n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PA27_9EURY
gufA1; GufA family transport protein (probable substrate zinc)
GufA family transport protein (Probable substrate zinc) {ECO:0000313|EMBL:CCQ36978.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" so
qs_1_scaffold_1596_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3221..4255)
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK3_NATPD
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
qs_1_scaffold_1596_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4373..4975)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48531.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_1596_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5157..7232)
DNA (2076bp) protein (692aa)
DNA ligase {ECO:0000255|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000255|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000255|HAMAP-Rule:MF_01588}; TaxID=348780 species="Archaea;
DNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DNLJ_NATPD
ligA; NAD-dependent DNA ligase LigA
qs_1_scaffold_1596_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7268..8191)
DNA (924bp) protein (308aa)
Aspartate aminotransferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KIE8_9EURY
Aspartate aminotransferase {ECO:0000313|EMBL:EMA19585.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica J
aspC2; aspartate aminotransferase
qs_1_scaffold_1596_9
unknown

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8324..8683
DNA (360bp) protein (120aa)

This feature has no annotations

qs_1_scaffold_1596_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8717..9907)
DNA (1191bp) protein (397aa)
Major facilitator superfamily transporter n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITJ8_NATPD
tp20; major facilitator family multidrug efflux transporter tetracyclin resistance protein
Major facilitator superfamily transport protein {ECO:0000313|EMBL:CAI48535.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
qs_1_scaffold_1596_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10006..10707
DNA (702bp) protein (234aa)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI48537.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI48537.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITJ6_NATPD
hypothetical protein
qs_1_scaffold_1596_12
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10773..12221
DNA (1449bp) protein (483aa)
circadian clock protein, KaiC (EC:2.7.11.1)
Circadian clock protein, KaiC n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FC31_9EURY
Circadian clock protein, KaiC {ECO:0000313|EMBL:ELZ56184.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium AT
qs_1_scaffold_1596_13
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12229..15174
DNA (2946bp) protein (982aa)
PAS-PAC-PAC sensing histidine kinase n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PJA7_9EURY
PAS-PAC-PAC sensing histidine kinase {ECO:0000313|EMBL:EMA68840.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidinge
fixL; PAS-PAC-PAC sensing histidine kinase
qs_1_scaffold_1596_14
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15312..15587
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LUG0_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM56317.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
qs_1_scaffold_1596_trna_1
unknown

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comp(15984..16057)
DNA (74bp)
transferRNA
qs_1_scaffold_1596_15
unknown

Not on your lists

comp(16114..16299)
DNA (186bp) protein (62aa)

This feature has no annotations

qs_1_scaffold_1596_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16376..17029)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQA7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36265.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_1_scaffold_1596_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17108..17239)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT68_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48666.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_1596_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17546..17896
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ70_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36263.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
qs_1_scaffold_1596_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17983..19719
DNA (1737bp) protein (579aa)
Probable sulfite/nitrite reductase (Ferredoxin) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKP3_NATM8
nirA2; probable sulfite/nitrite reductase (ferredoxin) rbh
Probable sulfite/nitrite reductase (Ferredoxin) {ECO:0000313|EMBL:CCQ36262.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
qs_1_scaffold_1596_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19810..20826
DNA (1017bp) protein (339aa)
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) {ECO:0000313|EMBL:CAI48661.1}; EC=3.4.11.- {ECO:0000313|EMBL:CAI48661.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacter
Aminopeptidase (Homolog to leucyl aminopeptidase / aminopeptidase T) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT73_NATPD
pepB_3; aminopeptidase ( leucyl aminopeptidase, aminopeptidase T) 3
qs_1_scaffold_1596_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21498..21869
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT74_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48660.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_1_scaffold_1596_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21944..22951)
DNA (1008bp) protein (336aa)
Matrixin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN32_9EURY
Matrixin {ECO:0000313|EMBL:EMA46149.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
matrixin
qs_1_scaffold_1596_23
unknown

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comp(23209..23280)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 24 items

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