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qs_1_scaffold_1947

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1947_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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113..880
DNA (768bp) protein (256aa)
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134};; TaxID=348780 species="Archaea; Eu
Indole-3-glycerol phosphate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQC2_NATPD
qs_1_scaffold_1947_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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870..2144
DNA (1275bp) protein (425aa)
trpB1; tryptophan synthase beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Tryptophan synthase beta chain n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XND1_NATM8
qs_1_scaffold_1947_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2141..3001
DNA (861bp) protein (287aa)
trpA; tryptophan synthase alpha subunit (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
Tryptophan synthase alpha chain n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNB1_NATM8
qs_1_scaffold_1947_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3061..3699
DNA (639bp) protein (213aa)
fba_2; fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQC5_NATPD
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
qs_1_scaffold_1947_5

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comp(3735..4451)
DNA (717bp) protein (239aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein id=24635986 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11174.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
qs_1_scaffold_1947_6

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comp(4448..5275)
DNA (828bp) protein (276aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=24635987 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ESS11175.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
ABC transporter
qs_1_scaffold_1947_7
unknown

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comp(5272..5400)
DNA (129bp) protein (43aa)

This feature has no annotations

qs_1_scaffold_1947_8
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5397..6137)
DNA (741bp) protein (247aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=24635988 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH03666.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halor
inner-membrane translocator
qs_1_scaffold_1947_9

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6299..7645
DNA (1347bp) protein (449aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIM2_9ARCH
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ESS11177.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;
extracellular ligand-binding receptor
qs_1_scaffold_1947_10

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7652..8932
DNA (1281bp) protein (427aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C7_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11178.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
qs_1_scaffold_1947_11
unknown

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9270..9701
DNA (432bp) protein (144aa)

This feature has no annotations

qs_1_scaffold_1947_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9590..11242)
DNA (1653bp) protein (551aa)
acs_5; acyl-CoA synthetase I 5 (EC:6.2.1.-)
Acyl-CoA synthetase {ECO:0000313|EMBL:CAI48173.1}; EC=6.2.1.- {ECO:0000313|EMBL:CAI48173.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomona
Acyl-CoA synthetase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUK7_NATPD
qs_1_scaffold_1947_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11471..12637
DNA (1167bp) protein (389aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000255|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000255|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
3-dehydroquinate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=DHQS_NATPD
qs_1_scaffold_1947_14
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13328..13744)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M7M9_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA40380.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_1_scaffold_1947_15
unknown

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comp(14764..15216)
DNA (453bp) protein (151aa)

This feature has no annotations

qs_1_scaffold_1947_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15344..16039)
DNA (696bp) protein (232aa)
aroD; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HA
3-dehydroquinate dehydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRN2_NATPD
qs_1_scaffold_1947_17
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(16061..17050)
DNA (990bp) protein (330aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
zim; CTAG modification methylase (EC:2.1.1.113)
CTAG modification methylase n=1 Tax=Haloferax sp. BAB2207 RepID=L5NWM6_9EURY
Displaying 17 items

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