ggKbase home page

qs_1_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_56_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..2974
DNA (2973bp) protein (991aa)
Lantibiotic modifying enzyme n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LDN7_9EURY
Lantibiotic modifying enzyme {ECO:0000313|EMBL:EMA30060.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
lantibiotic modifying enzyme
qs_1_scaffold_56_2

Not on your lists


3121..3549
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=2 Tax=Archaea RepID=U1QCP4_9EURY
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
qs_1_scaffold_56_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


3552..4145
DNA (594bp) protein (198aa)
30S ribosomal protein S7 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFW3_9EURY
30S ribosomal protein S5e (S7p)
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;
qs_1_scaffold_56_4
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4245..5027)
DNA (783bp) protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:AGB31188.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qs_1_scaffold_56_5
unknown

Not on your lists

5567..5749
DNA (183bp) protein (61aa)

This feature has no annotations

qs_1_scaffold_56_6
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6203..7441
DNA (1239bp) protein (413aa)
Major Facilitator Superfamily transporter n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7CT90_NATSJ
Major Facilitator Superfamily transporter rbh
Major Facilitator Superfamily transporter {ECO:0000313|EMBL:AFO57343.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (st
qs_1_scaffold_56_7
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7450..7752)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=M0J370_HALMT
Uncharacterized protein {ECO:0000313|EMBL:EMA03401.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
qs_1_scaffold_56_8
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7845..8489)
DNA (645bp) protein (215aa)
Class II aldolase/adducin family protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DDG7_9EURY
Class II aldolase/adducin family protein {ECO:0000313|EMBL:ELZ32204.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum ter
class II aldolase/adducin family protein
qs_1_scaffold_56_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8489..9187)
DNA (699bp) protein (233aa)
HAD-superfamily hydrolase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C5A8_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:ELZ18395.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 138
HAD-superfamily hydrolase
qs_1_scaffold_56_10
unknown

Not on your lists

comp(9277..9861)
DNA (585bp) protein (195aa)

This feature has no annotations

qs_1_scaffold_56_11
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9858..10388)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C1J9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ15809.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
qs_1_scaffold_56_12
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10623..11402)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BLJ2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ11756.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
qs_1_scaffold_56_13
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11476..11988)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LXA1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38212.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
qs_1_scaffold_56_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13228..16509
DNA (3282bp) protein (1094aa)
Elongation factor 2 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LG34_9EURY
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrial
translation elongation factor aEF-2
qs_1_scaffold_56_15
unknown

Not on your lists

16882..17109
DNA (228bp) protein (76aa)

This feature has no annotations

qs_1_scaffold_56_16
unknown

Not on your lists

17109..17285
DNA (177bp) protein (59aa)

This feature has no annotations

qs_1_scaffold_56_17
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17520..18059
DNA (540bp) protein (180aa)
ACT binding domain-containing protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W9G4_9EURY
ACT binding domain-containing protein
ACT binding domain-containing protein {ECO:0000313|EMBL:AGN01489.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp
qs_1_scaffold_56_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18056..19000
DNA (945bp) protein (315aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] id=24616505 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000313|EMBL:ESP87588.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halob
qs_1_scaffold_56_19
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19739..20392
DNA (654bp) protein (218aa)
elongation factor 1-alpha (EC:2.7.7.4)
Elongation factor 1-alpha n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NU99_HALUD
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
qs_1_scaffold_56_20
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


20401..20709
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Halococcus RepID=M0MVS7_HALMO
rps10p; 30S ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
qs_1_scaffold_56_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20756..21373
DNA (618bp) protein (206aa)
Rhomboid family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZ30_9EURY
Rhomboid family protein {ECO:0000313|EMBL:ELZ27687.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_56_trna_1
unknown

Not on your lists

21441..21512
DNA (72bp)
transferRNA
qs_1_scaffold_56_22
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21537..22313)
DNA (777bp) protein (259aa)
Esterase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZPQ1_9EURY
Esterase {ECO:0000313|EMBL:ELY88349.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
esterase
qs_1_scaffold_56_23
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22777..23184
DNA (408bp) protein (136aa)
hypothetical protein id=24617385 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Uncharacterized protein {ECO:0000313|EMBL:ERH08207.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
qs_1_scaffold_56_24
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23541..23957
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BMM3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ12105.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
archaeal flagellin-like protein
qs_1_scaffold_56_25
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24238..24645)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1N8D4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG92980.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qs_1_scaffold_56_26
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24647..24907)
DNA (261bp) protein (87aa)
AbrB family transcription regulator n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4W0_9EURY
AbrB family transcription regulator {ECO:0000313|EMBL:EMA52962.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
AbrB family transcription regulator
qs_1_scaffold_56_27
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24975..25205)
DNA (231bp) protein (77aa)
AsnC family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9I0_HALJB
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELY40653.1}; Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ADJ14392.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobac
qs_1_scaffold_56_28
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25207..25890)
DNA (684bp) protein (228aa)
TrkA-N domain-containing protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W690_9EURY
TrkA-N domain-containing protein
TrkA-N domain-containing protein {ECO:0000313|EMBL:AGN00208.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Har
qs_1_scaffold_56_29
unknown

Not on your lists

26059..26766
DNA (708bp) protein (236aa)

This feature has no annotations

Displaying items 1-30 of 73 in total

View Taxonomy