ggKbase home page

qs_1_scaffold_1235

Search features with annotation key words

Displaying 16 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_1235_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

64..654
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4T3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29702.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_1235_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

707..1162
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4C4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29703.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_1235_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1547..1885)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6B3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ29704.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_1_scaffold_1235_4
unknown

Not on your lists

comp(2023..2496)
DNA (474bp) protein (158aa)

This feature has no annotations

qs_1_scaffold_1235_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3091..4464)
DNA (1374bp) protein (458aa)
Oligoendopeptidase F n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2M5_9EURY
Oligoendopeptidase F {ECO:0000313|EMBL:ELZ29705.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
oligoendopeptidase F
qs_1_scaffold_1235_6
unknown

Not on your lists

4568..4834
DNA (267bp) protein (89aa)

This feature has no annotations

qs_1_scaffold_1235_7
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5021..6250
DNA (1230bp) protein (410aa)
IS1341-type transposase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JU29_NATP1
transposase, IS605 OrfB family, central region
IS1341-type transposase {ECO:0000313|EMBL:ELY69382.1}; Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:AGB33891.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrial
qs_1_scaffold_1235_8
unknown

Not on your lists

comp(6328..6537)
DNA (210bp) protein (70aa)

This feature has no annotations

qs_1_scaffold_1235_9
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6639..7574)
DNA (936bp) protein (312aa)
Methyltransferase type 11 n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PGS0_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA69083.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 135
methyltransferase type 11
qs_1_scaffold_1235_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7567..7941)
DNA (375bp) protein (125aa)
Regulatory protein ArsR n=1 Tax=Halobacterium sp. DL1 RepID=G4IGG0_9EURY
Regulatory protein ArsR {ECO:0000313|EMBL:AHG03410.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
ArsR family transcriptional regulator
qs_1_scaffold_1235_11
unknown

Not on your lists

comp(7959..8093)
DNA (135bp) protein (45aa)

This feature has no annotations

qs_1_scaffold_1235_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8152..9507
DNA (1356bp) protein (452aa)
Peptidase M28 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCS0_9EURY
Peptidase M28 {ECO:0000313|EMBL:EMA43143.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
peptidase M28
qs_1_scaffold_1235_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9613..11313
DNA (1701bp) protein (567aa)
Thiamine pyrophosphate protein domain protein TPP-binding protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HK78_9EURY
Thiamine pyrophosphate protein domain protein TPP-binding protein {ECO:0000313|EMBL:ESP90193.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candida
thiamine pyrophosphate protein domain protein TPP-binding protein
qs_1_scaffold_1235_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11489..12667
DNA (1179bp) protein (393aa)
Major facilitator superfamily protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY85_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:ELZ27573.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
major facilitator superfamily protein
qs_1_scaffold_1235_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12755..13876)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SJG4_9EURY
putative sorbitol dehydrogenase Tax=RBG_16_Bathyarchaeota_48_13_curated
alcohol dehydrogenase
qs_1_scaffold_1235_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14323..14661)
DNA (339bp) protein (113aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=797114 species="Archaea; Euryarch
leucyl-tRNA synthetase (EC:6.1.1.4)
Leucyl-tRNA ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D2J6_9EURY
Displaying 16 items

View Taxonomy