ggKbase home page

qs_2_scaffold_1

Search features with annotation key words

Displaying items 1-30 of 308 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_1_1
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..439
DNA (438bp) protein (146aa)
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-) id=24641192 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
probable oxidoreductase (short-chain dehydrogenase family) (EC:1.1.1.-)
Short-chain dehydrogenase {ECO:0000313|EMBL:ERH14033.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
qs_2_scaffold_1_2
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

780..1199
DNA (420bp) protein (140aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NVE1_HALUD
CMP/dCMP deaminase zinc-binding
CMP/dCMP deaminase zinc-binding {ECO:0000313|EMBL:ACV11225.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahens
qs_2_scaffold_1_3
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1321..1983)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJP5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ06508.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_2_scaffold_1_4
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2051..2431)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YNP3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY75855.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
hypothetical protein
qs_2_scaffold_1_5
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2523..2711)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0P965_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA65370.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.;
hypothetical protein
qs_2_scaffold_1_6

Not on your lists

comp(2850..3722)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MP19_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07610.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_2_scaffold_1_7
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3859..4410
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XMK6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY62999.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
qs_2_scaffold_1_8
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4428..4718
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQ58_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE01826.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
qs_2_scaffold_1_9
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6090..6518)
DNA (429bp) protein (143aa)
Transposase n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DU17_9EURY
Transposase {ECO:0000313|EMBL:ELZ38182.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.;"
transposase
qs_2_scaffold_1_10
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6635..7375
DNA (741bp) protein (247aa)
IclR family transcriptional regulator n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VPQ3_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELY38962.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ti
arcR4; ArcR family transcription regulator
qs_2_scaffold_1_11

Not on your lists

7540..9474
DNA (1935bp) protein (645aa)
Aconitase {ECO:0000313|EMBL:ESS05996.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ESS05996.1};; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Halobacterium sp. DL1 RepID=G4IIK2_9EURY
qs_2_scaffold_1_12

Not on your lists

comp(9631..11142)
DNA (1512bp) protein (504aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
NAD-dependent aldehyde dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y7F7_9ARCH
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:ESS06992.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
qs_2_scaffold_1_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11269..12474)
DNA (1206bp) protein (402aa)
CAIB/BAIF family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JCX6_HALJB
CAIB/BAIF family protein
CAIB/BAIF family protein {ECO:0000313|EMBL:ADJ16871.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
qs_2_scaffold_1_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12616..13722
DNA (1107bp) protein (369aa)
(R)-citramalate synthase (EC:2.3.1.182)
(R)-citramalate synthase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWN8_9EURY
(R)-citramalate synthase {ECO:0000313|EMBL:EMA36784.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
qs_2_scaffold_1_15
unknown

Not on your lists

comp(13858..14157)
DNA (300bp) protein (100aa)

This feature has no annotations

qs_2_scaffold_1_16
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14201..16150)
DNA (1950bp) protein (650aa)
hypothetical protein n=1 Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI000379EA63
putative hydantoinase
Putative hydantoinase {ECO:0000313|EMBL:AIJ21272.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
qs_2_scaffold_1_17
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16166..18253)
DNA (2088bp) protein (696aa)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6DEP8_9BACI
Hydantoinase A {ECO:0000313|EMBL:GAF45513.1}; TaxID=1219028 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis NBRC 100605.;"
5-oxoprolinase (ATP-hydrolyzing)
qs_2_scaffold_1_18

Not on your lists

18451..19575
DNA (1125bp) protein (375aa)
Zn-dependent alcohol dehydrogenase, class III n=1 Tax=uncultured archaeon A07HR60 RepID=V4XPM9_9ARCH
Zn-dependent alcohol dehydrogenase, class III {ECO:0000313|EMBL:ESS10439.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
alcohol dehydrogenase zinc-binding domain-containing protein
qs_2_scaffold_1_19
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21011..21361
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) RepID=O52032_HALSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAC82912.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
qs_2_scaffold_1_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21448..21888)
DNA (441bp) protein (147aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAL7_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EMA41430.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
acyl dehydratase
qs_2_scaffold_1_21
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21952..23166)
DNA (1215bp) protein (405aa)
Acyl-CoA dehydrogenase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VP17_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELY38950.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
acyl-CoA dehydrogenase
qs_2_scaffold_1_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23559..23735
DNA (177bp) protein (59aa)
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:CAI49221.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CAI49221.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
qs_2_scaffold_1_23
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23739..24164
DNA (426bp) protein (142aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MAP1_HALMO
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EMA42857.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM
qs_2_scaffold_1_24
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24203..24346
DNA (144bp) protein (48aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SVP5_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EMA42857.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM
qs_2_scaffold_1_25
unknown

Not on your lists

24575..24790
DNA (216bp) protein (72aa)

This feature has no annotations

qs_2_scaffold_1_26
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25163..25435)
DNA (273bp) protein (91aa)
IS240-type transposase ISNph1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN94_NATPD
transposase
ISH14-type transposase ISNph1 {ECO:0000313|EMBL:CAI50410.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_2_scaffold_1_27
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25481..25693)
DNA (213bp) protein (71aa)
Transposase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AIP1_NATGS
transposase
Transposase {ECO:0000313|EMBL:AFZ73651.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (strain ATCC 4
qs_2_scaffold_1_28
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26862..27635)
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IEA4_HALRX
enoyl-CoA hydratase/carnithine racemase
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:AGB17104.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (st
qs_2_scaffold_1_29
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28230..29015
DNA (786bp) protein (262aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIV1_9EURY
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1
qs_2_scaffold_1_30
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29009..29260
DNA (252bp) protein (84aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=797299
2-phospho-L-lactate guanylyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=COFC_HALMD
2-phospho-L-lactate guanylyltransferase
Displaying items 1-30 of 308 in total

View Taxonomy