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qs_2_scaffold_116

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_116_1
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

123..776
DNA (654bp) protein (218aa)
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein
hypothetical protein id=14632961 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin9_gal15 organism_group=GAL15
qs_2_scaffold_116_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(845..2101)
DNA (1257bp) protein (419aa)
Putative colanic acid biosynthesis glycosyl transferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S607_SALRD
colanic acid biosynthesis glycosyl transferase
Putative colanic acid biosynthesis glycosyl transferase {ECO:0000313|EMBL:ABC43929.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
qs_2_scaffold_116_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2392..3348)
DNA (957bp) protein (319aa)
Sugar epimerase BlmG {ECO:0000313|EMBL:CBH23637.1}; EC=5.1.3.- {ECO:0000313|EMBL:CBH23637.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; S
Sugar epimerase BlmG n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6I2_SALRM
wcaG; Sugar epimerase BlmG
qs_2_scaffold_116_4
unknown

Not on your lists

comp(3722..3871)
DNA (150bp) protein (50aa)

This feature has no annotations

qs_2_scaffold_116_5
Enterovibrio calviensis, Enterovibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3960..5087)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=Enterovibrio calviensis RepID=UPI000311865E
qs_2_scaffold_116_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5110..6342)
DNA (1233bp) protein (411aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTU8_9EURY
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EMA36876.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
glycosyl transferase, group 1 family
qs_2_scaffold_116_7
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6339..7451)
DNA (1113bp) protein (371aa)
Pyruvyltransferase superfamily protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A3L5_PELCD
hypothetical protein
Pyruvyltransferase superfamily protein {ECO:0000313|EMBL:ABA89042.2}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pe
qs_2_scaffold_116_8
unknown

Not on your lists

comp(7562..8347)
DNA (786bp) protein (262aa)

This feature has no annotations

qs_2_scaffold_116_9
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8504..9433)
DNA (930bp) protein (310aa)
Sulfotransferase n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGC4_SYNFM
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ABK16476.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobact
qs_2_scaffold_116_10
unknown

Not on your lists

comp(9439..10674)
DNA (1236bp) protein (412aa)

This feature has no annotations

qs_2_scaffold_116_11
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(10709..11371)
DNA (663bp) protein (221aa)
Transposase (IS4 family) n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q093Z5_STIAD
transposase Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
transposase, is4-like protein
qs_2_scaffold_116_12
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11833..12225)
DNA (393bp) protein (131aa)
Transposase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNR6_STIAD
transposase
Transposase {ECO:0000313|EMBL:EAU67068.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aur
qs_2_scaffold_116_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12414..13511)
DNA (1098bp) protein (366aa)
Glycosyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MS94_9EURY
Glycosyltransferase {ECO:0000313|EMBL:EMA48238.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
hypothetical protein
qs_2_scaffold_116_14
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13554..14432)
DNA (879bp) protein (293aa)
Sulfotransferase domain containing protein n=1 Tax=Beggiatoa sp. PS RepID=A7BSU0_9GAMM
conserved hypothetical protein
Sulfotransferase family protein {ECO:0000313|EMBL:AHM58415.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flam
qs_2_scaffold_116_15
Methylophaga thiooxydans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14492..15478)
DNA (987bp) protein (329aa)
UPI0003CE09D8 related cluster n=1 Tax=unknown RepID=UPI0003CE09D8
Uncharacterized protein {ECO:0000313|EMBL:KGM06564.1}; TaxID=392484 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga thi
polysaccharide deacetylase
qs_2_scaffold_116_16
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15599..16471)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI000369D70D
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ACK72572.1}; TaxID=65393 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcu
qs_2_scaffold_116_17
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16480..17901)
DNA (1422bp) protein (474aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WJR4_DESOD
Uncharacterized protein {ECO:0000313|EMBL:KGK91257.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.
polysaccharide biosynthesis protein
qs_2_scaffold_116_18
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18091..19092)
DNA (1002bp) protein (334aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWM7_RUBXD
Nucleoside-diphosphate-sugar epimerase
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AHY45778.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
qs_2_scaffold_116_19
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19221..19997)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GHX4_LACS5
hypothetical protein Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
hypothetical protein
qs_2_scaffold_116_20
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20427..21599)
DNA (1173bp) protein (391aa)
UDP-sulfoquinovose synthase (EC:3.13.1.1)
NAD dependent epimerase/dehydratase family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VZZ1_9CYAN
NAD dependent epimerase/dehydratase family {ECO:0000313|EMBL:EDX72511.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofascicu
qs_2_scaffold_116_21
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21596..22666)
DNA (1071bp) protein (357aa)
Polysaccharide biosynthesis protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VZZ0_9CYAN
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDX72400.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus cht
polysaccharide biosynthesis protein CapD
qs_2_scaffold_116_22
unknown

Not on your lists

22702..23079
DNA (378bp) protein (126aa)

This feature has no annotations

qs_2_scaffold_116_23
uncultured haloarchaeon, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22924..23898)
DNA (975bp) protein (325aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=uncultured haloarchaeon RepID=A5YSN9_9EURY
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ABQ75996.1}; TaxID=160804 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; environmental samples.;" source="un
NAD-dependent epimerase/dehydratase
qs_2_scaffold_116_24
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(23898..24623)
DNA (726bp) protein (242aa)
adenylylsulfate reductase (EC:1.8.4.8); K00390 phosphoadenosine phosphosulfate reductase [EC:1.8.4.8] Tax=CG_Anaero_04
thioredoxin-dependent phosophoadenylyl-sulfate reductase (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase id=4809917 bin=GWA2_OP3_52_12 species=Parvularcula bermudensis genus=Parvularcula taxon_order=Parvularculales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
qs_2_scaffold_116_25
RLO_PLX_64_10, Bacteria

Not on your lists

comp(25100..25318)
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
qs_2_scaffold_116_26
Candidatus Magnetoovum chiemensis, Candidatus Magnetoovum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(26091..26573)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G1Y9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KJR43797.1}; TaxID=1609970 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetoovum.;" source="Candidatus Magnetoovum chiemensis.
hypothetical protein
qs_2_scaffold_116_27
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

comp(26551..26814)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YH44_THEYD
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
hypothetical protein
qs_2_scaffold_116_28
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(27071..27475)
DNA (405bp) protein (135aa)
DNA-binding protein n=1 Tax=Hippea alviniae RepID=UPI0003B3A904
hypothetical protein Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein
qs_2_scaffold_116_29
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27459..27833)
DNA (375bp) protein (125aa)
DNA polymerase subunit beta n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D022
DNA polymerase subunit beta
DNA polymerase subunit beta {ECO:0000313|EMBL:AJF07657.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkali
qs_2_scaffold_116_30
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28041..28226)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SN13_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFI36074.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desul
Displaying items 1-30 of 32 in total

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