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qs_2_scaffold_380

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_380_1
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..271
DNA (270bp) protein (90aa)
Acyl-CoA dehydrogenase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IFU1_HALRX
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGB17101.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
qs_2_scaffold_380_2
unknown

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comp(253..366)
DNA (114bp) protein (38aa)

This feature has no annotations

qs_2_scaffold_380_3

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comp(363..740)
DNA (378bp) protein (126aa)
transposase ISH4 n=1 Tax=Halomicrobium katesii RepID=UPI00037D2615
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06414.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_2_scaffold_380_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(691..1089)
DNA (399bp) protein (133aa)
5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NA09_9EURY
5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e {ECO:0000313|EMBL:EMA54408.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
hypothetical protein
qs_2_scaffold_380_5
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1422..3509
DNA (2088bp) protein (696aa)
Hydantoin utilization protein A n=1 Tax=Streptomyces sp. AA4 RepID=D9VED0_9ACTO
Hydantoin utilization protein A {ECO:0000313|EMBL:EFL07990.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
N-methylhydantoinase A
qs_2_scaffold_380_6
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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3510..5459
DNA (1950bp) protein (650aa)
5-oxoprolinase (EC:3.5.2.9)
Hydantoin utilization protein B n=1 Tax=Streptomyces sp. AA4 RepID=D9VEC9_9ACTO
Hydantoin utilization protein B {ECO:0000313|EMBL:EFL07989.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
qs_2_scaffold_380_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

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5456..5740
DNA (285bp) protein (95aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
qs_2_scaffold_380_8
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5802..6791)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP68_9EURY
2-oxoisovalerate dehydrogenase subunit beta
2-oxoisovalerate dehydrogenase subunit beta {ECO:0000313|EMBL:AHG02155.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagni
qs_2_scaffold_380_9
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6799..6921)
DNA (123bp) protein (41aa)
2-oxo-3-methylvalerate dehydrogenase E1 component subunit alpha n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WNI2_9EURY
hypothetical protein
2-oxo-3-methylvalerate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:KDE57076.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.
qs_2_scaffold_380_10
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6926..7942)
DNA (1017bp) protein (339aa)
2-oxo-3-methylvalerate dehydrogenase E1 component subunit alpha n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AKQ5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG02156.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qs_2_scaffold_380_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8108..8548
DNA (441bp) protein (147aa)
MaoC domain protein dehydratase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0A9_HALMD
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ACV48901.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qs_2_scaffold_380_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8827..10299
DNA (1473bp) protein (491aa)
Amino acid permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJ28_HALMO
Amino acid permease {ECO:0000313|EMBL:EMA45707.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
amino acid permease
qs_2_scaffold_380_13
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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10332..11543
DNA (1212bp) protein (404aa)
L-threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RBG_16_Bathyarchaeota_48_13_curated
Threonine synthase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I739_HALRX
threonine synthase
qs_2_scaffold_380_14
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11608..12771)
DNA (1164bp) protein (388aa)
Aminotransferase class I and II n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QWV1_9EURY
Aminotransferase class I and II {ECO:0000313|EMBL:EFW90754.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
class I and II aminotransferase
qs_2_scaffold_380_15
Rhodococcus sp. BCP1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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12859..13875
DNA (1017bp) protein (339aa)
aldolase n=1 Tax=Sciscionella marina RepID=UPI00037C44D0
Aldolase {ECO:0000313|EMBL:KDE09923.1}; TaxID=931223 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. BCP1.;"
narC; putative aldolase NarC
qs_2_scaffold_380_16

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comp(13869..15344)
DNA (1476bp) protein (492aa)
NAD-dependent aldehyde dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y7F7_9ARCH
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:ESS06992.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qs_2_scaffold_380_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15431..16579
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZAK7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57670.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
aminotransferase class V
qs_2_scaffold_380_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16652..17374
DNA (723bp) protein (241aa)
Alpha/beta hydrolase fold protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLN0_NATM8
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:CCQ38008.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
qs_2_scaffold_380_19
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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17476..18309
DNA (834bp) protein (278aa)
Spermidine/putrescine ABC transporter permease n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XUP7_9EURY
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ELY65519.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema v
potC; spermidine/putrescine ABC transporter permease
qs_2_scaffold_380_20
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(18371..20086)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XY72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY65518.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
groL; hypothetical protein
qs_2_scaffold_380_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20216..20686
DNA (471bp) protein (157aa)
bcp; peroxiredoxin (thioredoxin-dependent hydroperoxide peroxidase) (EC:1.11.1.15)
Peroxiredoxin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MML9_9EURY
Peroxiredoxin {ECO:0000313|EMBL:EMA46916.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
qs_2_scaffold_380_22
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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20761..21264
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JR55_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB32841.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
qs_2_scaffold_380_23
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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21373..22269
DNA (897bp) protein (299aa)
ABC-type transport system permease protein (Probable substrate spermidine/putrescine) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQX8_HALVD
potB; spermidine/putrescine ABC transporter permease
ABC-type transport system permease protein (Probable substrate spermidine/putrescine) {ECO:0000313|EMBL:ADE02187.1}; Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ELY31421.1}; TaxID
qs_2_scaffold_380_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(22528..22746)
DNA (219bp) protein (73aa)
Transposase ISHwa4 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3C4_9EURY
Transposase ISHwa4 {ECO:0000313|EMBL:EMA52018.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
ISHwa4-type transposase
Displaying 24 items

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