ggKbase home page

qs_2_scaffold_397

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_397_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..794)
DNA (792bp) protein (264aa)
Xylose isomerase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZB9_9EURY
Xylose isomerase {ECO:0000313|EMBL:ELZ27973.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1484
xylose isomerase
qs_2_scaffold_397_2
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1012..2127
DNA (1116bp) protein (372aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1F4_HALTV
alcohol dehydrogenase zinc-binding domain protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADB63201.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Halot
qs_2_scaffold_397_3
unknown

Not on your lists

2127..2324
DNA (198bp) protein (66aa)

This feature has no annotations

qs_2_scaffold_397_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2393..3370
DNA (978bp) protein (326aa)
Monooxygenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1G1_9EURY
Monooxygenase {ECO:0000313|EMBL:ELZ27984.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;
monooxygenase
qs_2_scaffold_397_5
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3522..5336
DNA (1815bp) protein (605aa)
Thiamine pyrophosphate protein central region n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1E9_HALTV
thiamine pyrophosphate protein central region
Thiamine pyrophosphate protein central region {ECO:0000313|EMBL:ADB63196.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterri
qs_2_scaffold_397_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5339..6172
DNA (834bp) protein (278aa)
Aldo/keto reductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXN5_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ27981.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1
aldo/keto reductase
qs_2_scaffold_397_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6667..7488
DNA (822bp) protein (274aa)
Chromosome segregation protein (Spc25, Csm1, Pcs1) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVH9_9EURY
Chromosome segregation protein (Spc25, Csm1, Pcs1) {ECO:0000313|EMBL:EMA48430.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
Chromosome segregation protein (Spc25, Csm1, Pcs1)
qs_2_scaffold_397_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7592..8317
DNA (726bp) protein (242aa)
Kinetochore-Ndc80 complex, subunit Spc25 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M107_9EURY
Kinetochore-Ndc80 complex, subunit Spc25 {ECO:0000313|EMBL:EMA38045.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
Chromosome segregation protein (Spc25, Csm1, Pcs1)
qs_2_scaffold_397_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8363..8689
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZVF5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57013.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_2_scaffold_397_10
unknown

Not on your lists

9092..9241
DNA (150bp) protein (50aa)

This feature has no annotations

qs_2_scaffold_397_11
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9384..9746)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WME7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50406.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
aromatic ring hydroxylating enzyme
qs_2_scaffold_397_12
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9749..10828)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WLZ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY50407.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
amidohydrolase family protein
qs_2_scaffold_397_13
Nocardioides sp. JS1661, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11210..12859
DNA (1650bp) protein (550aa)
Putative oxidoreductase n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JTJ8_HALH3
Phytoene dehydrogenase {ECO:0000313|EMBL:AIQ77710.1}; TaxID=1517491 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. JS1661.;"
putative oxidoreductase
qs_2_scaffold_397_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13001..13387
DNA (387bp) protein (129aa)
Phosphatidylethanolamine-binding protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LEE6_HALJP
Phosphatidylethanolamine-binding protein {ECO:0000313|EMBL:EMA30355.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
phospholipid-binding protein
qs_2_scaffold_397_15
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13347..14453
DNA (1107bp) protein (369aa)
Betaine aldehyde dehydrogenase (BADH) protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JM60_AGRRK
betB; betaine aldehyde dehydrogenase (BADH) protein
Betaine aldehyde dehydrogenase (BADH) protein {ECO:0000313|EMBL:ACM28774.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium gro
qs_2_scaffold_397_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14649..16415)
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003159160
thiamine pyrophosphate enzyme-like TPP-binding protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
thiamine pyrophosphate enzyme-like TPP-binding protein
qs_2_scaffold_397_17
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16590..17585)
DNA (996bp) protein (332aa)
Transcriptional regulator n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IIH0_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ95847.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512
transcriptional regulator
qs_2_scaffold_397_18
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18393..18890)
DNA (498bp) protein (166aa)
Flavin reductase ActVB protein {ECO:0000313|EMBL:ERJ07266.1}; EC=1.5.1.38 {ECO:0000313|EMBL:ERJ07266.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
Flavin reductase ActVB protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2E5Q1_9EURY
flavin reductase domain protein FMN-binding
qs_2_scaffold_397_19
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(19047..19355)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0003633EED
Uncharacterized protein {ECO:0000313|EMBL:KIF35816.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
qs_2_scaffold_397_20
unknown

Not on your lists

19383..19502
DNA (120bp) protein (40aa)

This feature has no annotations

qs_2_scaffold_397_21
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19641..20021
DNA (381bp) protein (127aa)
Transposase (ISH5) n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0APS9_9EURY
Transposase (ISH5) {ECO:0000313|EMBL:ELY99942.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
transposase (ISH5)
Displaying 21 items

View Taxonomy