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qs_2_scaffold_471

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_471_1
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..330)
DNA (330bp) protein (110aa)
short-chain dehydrogenase/reductase SDR id=24656044 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Dehydrogenase {ECO:0000313|EMBL:ERG89389.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
putative oxidoreductase, SDR family
qs_2_scaffold_471_2
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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640..1047
DNA (408bp) protein (136aa)
Putative metal-dependent hydrolase n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1Q0S8_9EURY
Putative metal-dependent hydrolase {ECO:0000313|EMBL:ERG99877.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp.
qs_2_scaffold_471_3
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1121..1237)
DNA (117bp) protein (39aa)
ISH9-type transposase ISH1 n=2 Tax=Halobacteriaceae RepID=B0R389_HALS3
transposase (ISH1)
Uncharacterized protein {ECO:0000313|EMBL:AAG18675.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
qs_2_scaffold_471_4

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comp(1568..2638)
DNA (1071bp) protein (357aa)
Zn-dependent alcohol dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZSH8_9ARCH
Zn-dependent alcohol dehydrogenase {ECO:0000313|EMBL:ESS05670.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Zn-dependent alcohol dehydrogenase
qs_2_scaffold_471_5
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2758..3045
DNA (288bp) protein (96aa)
adh10; zinc-binding dehydrogenase (EC:1.1.1.1)
Zinc-binding dehydrogenase n=2 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=M0IP87_HALMT
Zinc-binding dehydrogenase {ECO:0000313|EMBL:ELZ97299.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain
qs_2_scaffold_471_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3300..3788
DNA (489bp) protein (163aa)
Zn-dependent oxidoreductase/NADPH2:quinone reductase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAL4_9EURY
Zn-dependent oxidoreductase/NADPH2:quinone reductase {ECO:0000313|EMBL:EMA18256.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source
sorbitol dehydrogenase
qs_2_scaffold_471_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3848..4618
DNA (771bp) protein (257aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halogranum salarium B-1 RepID=J3JFF0_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EJN59199.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
short-chain dehydrogenase/reductase SDR
qs_2_scaffold_471_8
unknown

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comp(4656..5087)
DNA (432bp) protein (144aa)

This feature has no annotations

qs_2_scaffold_471_9
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5128..5901)
DNA (774bp) protein (258aa)
Monosaccharide-transporting ATPase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JNV7_9EURY
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EMA10018.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaii
monosaccharide ABC-transport system ATP binding protein
qs_2_scaffold_471_10
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6225..7211
DNA (987bp) protein (329aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C309_9CLOT
Leucobacter komagatae strain VKM ST2845 L_komagatae_42, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51369.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Le
sugar ABC transporter permease
qs_2_scaffold_471_11
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7551..8801
DNA (1251bp) protein (417aa)
UPI0003D1BBE8 related cluster n=1 Tax=unknown RepID=UPI0003D1BBE8
Leucobacter komagatae strain VKM ST2845 L_komagatae_33, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51510.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Le
sugar ABC transporter substrate-binding protein
qs_2_scaffold_471_12
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9047..9409
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQ52_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE01835.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
qs_2_scaffold_471_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9557..12229
DNA (2673bp) protein (891aa)
ATP-dependent DNA helicase Dna2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQG3_9EURY
ATP-dependent DNA helicase Dna2 {ECO:0000313|EMBL:EFW93227.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
dna2; ATP-dependent DNA helicase Dna2
Displaying 13 items

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