ggKbase home page

qs_2_scaffold_538

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_538_1
unknown

Not on your lists

comp(1..288)
DNA (288bp) protein (96aa)

This feature has no annotations

qs_2_scaffold_538_2
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(418..1758)
DNA (1341bp) protein (447aa)
N-sulfoglucosamine sulfohydrolase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FNS5_9EURY
N-sulfoglucosamine sulfohydrolase {ECO:0000313|EMBL:ELZ61600.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochsteniu
N-sulfoglucosamine sulfohydrolase
qs_2_scaffold_538_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1912..3465)
DNA (1554bp) protein (518aa)
Choline-sulfatase n=2 Tax=Halococcus hamelinensis RepID=M0LUE0_9EURY
Choline-sulfatase {ECO:0000313|EMBL:EMA37187.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hypothetical protein
qs_2_scaffold_538_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3636..5042)
DNA (1407bp) protein (469aa)
Transposase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMT6_9EURY
Transposase {ECO:0000313|EMBL:EMA46034.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
oxidoreductase domain-containing protein
qs_2_scaffold_538_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5615..6343
DNA (729bp) protein (243aa)
ArcR family transcription regulator n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5Q4_HALJP
ArcR family transcription regulator {ECO:0000313|EMBL:EMA28418.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japo
arcR16; ArcR family transcription regulator
qs_2_scaffold_538_6
unknown

Not on your lists

comp(6420..6629)
DNA (210bp) protein (70aa)

This feature has no annotations

qs_2_scaffold_538_7
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(6626..7477)
DNA (852bp) protein (284aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CHE4_THET1
xylose isomerase
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:ACZ43165.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
qs_2_scaffold_538_8
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7513..10281)
DNA (2769bp) protein (923aa)
alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase [EC:3.2.1.40] Tax=RBG_13_Planctomycetes_62_9_curated
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000366D2D7
alpha-L-rhamnosidase
qs_2_scaffold_538_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10333..10749)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6NGM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05366.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
qs_2_scaffold_538_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11455..12351
DNA (897bp) protein (299aa)
phytanoyl-CoA dioxygenase id=24615538 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:ESP87081.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halo
phytanoyl-CoA dioxygenase
qs_2_scaffold_538_11
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12354..13061
DNA (708bp) protein (236aa)
Sulfatase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TX88_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KEQ27823.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
sulfatase
qs_2_scaffold_538_12
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

13143..13586
DNA (444bp) protein (148aa)
Sulfatase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TX88_9CHLR
arylsulfatase A family protein Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
qs_2_scaffold_538_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13626..14747)
DNA (1122bp) protein (374aa)
Oxidoreductase domain-containing protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7W3_9EURY
oxidoreductase domain-containing protein
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:AGN01253.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum
qs_2_scaffold_538_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14817..15902)
DNA (1086bp) protein (362aa)
oxidoreductase domain-containing protein id=24613360 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Oxidoreductase domain protein {ECO:0000313|EMBL:ESP89996.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
oxidoreductase
qs_2_scaffold_538_15
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16095..16904)
DNA (810bp) protein (270aa)
Oxidoreductase domain-containing protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7W3_9EURY
oxidoreductase domain-containing protein
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:AGN01253.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum
Displaying 15 items

View Taxonomy