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qs_2_scaffold_593

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_593_1
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..255
DNA (255bp) protein (85aa)
IclR family transcriptional regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCK2_9EURY
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AHG01851.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola l
qs_2_scaffold_593_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(749..1006)
DNA (258bp) protein (86aa)
Transposase ISHwa4 n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LJT4_HALWC
transposase ISHwa4
ISHwa4-type transposase ISHwa4 {ECO:0000313|EMBL:CCC41018.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi
qs_2_scaffold_593_3
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1031..1429)
DNA (399bp) protein (133aa)
Transposase ISHwa4 n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XAF4_9EURY
Transposase ISHwa4 {ECO:0000313|EMBL:ELY58734.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795.;"
transposase ISHwa4
qs_2_scaffold_593_4
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1500..2309)
DNA (810bp) protein (270aa)
Transcription regulator n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0ILQ7_9EURY
Transcription regulator {ECO:0000313|EMBL:ELZ96394.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
IclR family transcriptional regulator
qs_2_scaffold_593_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2459..3010
DNA (552bp) protein (184aa)
Putative ISH8 transposase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MS13_9EURY
Putative ISH8 transposase {ECO:0000313|EMBL:EMA48158.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
tnp; putative ISH8 transposase
qs_2_scaffold_593_6
unknown

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comp(3143..3466)
DNA (324bp) protein (108aa)

This feature has no annotations

qs_2_scaffold_593_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3599..4501)
DNA (903bp) protein (301aa)
ABC transporter permease n=1 Tax=Marinococcus halotolerans RepID=UPI0003B740BC
ABC transporter permease {ECO:0000313|EMBL:KHK95527.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
binding-protein-dependent transport systems inner membrane component
qs_2_scaffold_593_8
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4501..5427)
DNA (927bp) protein (309aa)
sugar ABC transporter permease n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B78B61
sugar ABC transporter permease
Lactose transport system (Permease) {ECO:0000313|EMBL:ACZ89297.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporan
qs_2_scaffold_593_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5592..6989)
DNA (1398bp) protein (466aa)
extracellular solute-binding protein n=1 Tax=Paenibacillus sp. JC66 RepID=UPI0002896FFD
family 1 extracellular solute-binding protein
Uncharacterized protein {ECO:0000313|EMBL:EHI57191.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
qs_2_scaffold_593_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7092..8204)
DNA (1113bp) protein (371aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVI1_HALBP
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADQ68865.1}; Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY28707.1}; TaxID=469382 species="Archaea; Eur
qs_2_scaffold_593_11
Pantoea sp. 3.5.1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9394..10539)
DNA (1146bp) protein (382aa)
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Pantoea sp. GM01 RepID=J2M7M8_9ENTR
Enolase {ECO:0000313|EMBL:KKD32128.1}; TaxID=1522060 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. 3.5.1.;"
Mandelate racemasemuconate lactonizing protein
qs_2_scaffold_593_12
RLO_PLX_64_10, Bacteria

Not on your lists

10635..11801
DNA (1167bp) protein (389aa)
mandelate racemase n=1 Tax=Agromyces subbeticus RepID=UPI0003B371F4
Mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Mandelate racemasemuconate lactonizing protein
qs_2_scaffold_593_13
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11946..15215)
DNA (3270bp) protein (1090aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6JN62_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST18254.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
hypothetical protein
qs_2_scaffold_593_14
Paenibacillus sp. FSL R7-277, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(15160..15831)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI0003650525
Uncharacterized protein {ECO:0000313|EMBL:ETT74640.1}; TaxID=1227352 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-277.;"
glycoside hydrolase
qs_2_scaffold_593_15
Streptomyces niveus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16061..18175)
DNA (2115bp) protein (705aa)
Uncharacterized protein n=1 Tax=Streptomyces niveus NCIMB 11891 RepID=V6JN62_STRNV
Uncharacterized protein {ECO:0000313|EMBL:EST18254.1}; TaxID=1352941 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces niveus NCIMB 11891.;"
hypothetical protein
qs_2_scaffold_593_16
Vibrio scophthalmi, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18541..19470)
DNA (930bp) protein (310aa)
putative Dihydrodipicolinate synthetase (EC:4.3.3.7)
Dihydrodipicolinate synthetase n=1 Tax=Vibrio scophthalmi LMG 19158 RepID=F9RV63_9VIBR
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EGU29787.1}; TaxID=870967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio scophthalmi LMG 1
qs_2_scaffold_593_17
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19584..20348
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HNP5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ85322.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
sugar epimerase/dehydratase homolog
qs_2_scaffold_593_18
unknown

Not on your lists

20721..21029
DNA (309bp) protein (103aa)

This feature has no annotations

qs_2_scaffold_593_19
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21094..21363
DNA (270bp) protein (90aa)
ISH9-type transposase n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E2L8_9EURY
transposase, IS5 family
ISH9-type transposase {ECO:0000313|EMBL:ELZ42030.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 192
Displaying 19 items

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