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qs_2_scaffold_623

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_623_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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319..603
DNA (285bp) protein (95aa)
Transposase (ISH8) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBF9_9EURY
Transposase (ISH8) {ECO:0000313|EMBL:EMA54429.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.
ISH8-type transposase
qs_2_scaffold_623_2
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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823..1488
DNA (666bp) protein (222aa)
Dimethylmenaquinone methyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HNA0_9EURY
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000313|EMBL:CQR52530.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp.
dimethylmenaquinone methyltransferase
qs_2_scaffold_623_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1543..2595)
DNA (1053bp) protein (351aa)
Mannonate dehydratase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQL4_9EURY
Mannonate dehydratase {ECO:0000313|EMBL:ELZ24179.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
mannonate dehydratase
qs_2_scaffold_623_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2648..3607)
DNA (960bp) protein (320aa)
Gluconolactonase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITZ9_KORVE
gluconolactonase
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:ADB53198.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source
qs_2_scaffold_623_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3635..4654)
DNA (1020bp) protein (340aa)
Aldose 1-epimerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWA0_HALMD
aldose 1-epimerase
Aldose 1-epimerase {ECO:0000313|EMBL:ACV46241.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (stra
qs_2_scaffold_623_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4775..5455
DNA (681bp) protein (227aa)
short-chain dehydrogenase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B676FA
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AGN01235.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum
qs_2_scaffold_623_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5510..6271
DNA (762bp) protein (254aa)
glucose-1-dehydrogenase n=1 Tax=Agromyces subbeticus RepID=UPI0003B592E8
Uncharacterized protein {ECO:0000313|EMBL:CDM65385.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
qs_2_scaffold_623_8
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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6346..7305
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGH0_9CLOT
ABC transporter permease; K02025 multiple sugar transport system permease protein Tax=RBG_13_Spirochaetes_68_11_curated
ABC transporter permease
qs_2_scaffold_623_9
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7305..8171
DNA (867bp) protein (289aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5EHP3_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCU81016.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaer
qs_2_scaffold_623_10
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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comp(8428..9795)
DNA (1368bp) protein (456aa)
Putative extracellular solute-binding protein family 1 n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5Y9Y1_TREAZ
sugar ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RBG_13_Spirochaetes_68_11_curated
putative family 1 extracellular solute-binding protein
qs_2_scaffold_623_11
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(10029..11099)
DNA (1071bp) protein (357aa)
ABC transporter related n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NIS2_ROSCS
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABU57375.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus cas
qs_2_scaffold_623_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11171..12382)
DNA (1212bp) protein (404aa)
N-acylglucosamine 2-epimerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUN1_9EURY
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:EMA48479.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
N-acylglucosamine 2-epimerase
qs_2_scaffold_623_13
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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12609..13412
DNA (804bp) protein (268aa)
IclR family transcriptional regulator n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FXA9_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ63918.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahoven
IclR family transcriptional regulator
qs_2_scaffold_623_14
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13796..14794)
DNA (999bp) protein (333aa)
Transposase (ISH18) n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KXX9_HALAR
Transposase (ISH18) {ECO:0000313|EMBL:EMA25728.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12
transposase ISH18
qs_2_scaffold_623_15
unknown

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comp(14904..15113)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 15 items

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