ggKbase home page

qs_2_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_66_1
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2..127
DNA (126bp) protein (42aa)
Blue (Type 1) copper domain-containing protein {ECO:0000313|EMBL:AHM63038.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.
qs_2_scaffold_66_2
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1400..3319
DNA (1920bp) protein (640aa)
Membrane-bound dehydrogenase domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRY1_9BACT
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:CCH56659.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi
membrane-bound dehydrogenase domain-containing protein
qs_2_scaffold_66_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3917..7123
DNA (3207bp) protein (1069aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036F5F9D
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH52058.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent receptor plug
qs_2_scaffold_66_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7189..8931
DNA (1743bp) protein (581aa)
RagB/SusD domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDT3_9BACT
RagB/SusD domain protein {ECO:0000313|EMBL:CCH52057.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RagB/SusD domain-containing protein
qs_2_scaffold_66_5
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

9007..11115
DNA (2109bp) protein (703aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y379_PEDHD
hypothetical protein Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
hypothetical protein
qs_2_scaffold_66_6
unknown

Not on your lists

comp(11634..11951)
DNA (318bp) protein (106aa)

This feature has no annotations

qs_2_scaffold_66_7
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12014..12586
DNA (573bp) protein (191aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JYJ5_9BACT
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ELR72719.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imteche
ECF subfamily RNA polymerase sigma-24 subunit
qs_2_scaffold_66_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12935..14110
DNA (1176bp) protein (392aa)
Anti-FecI sigma factor, FecR n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SG51_RHOMR
FecR anti-FecI sigma factor
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEN72951.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_2_scaffold_66_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14182..17859
DNA (3678bp) protein (1226aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036F5F9D
TonB-dependent receptor plug {ECO:0000313|EMBL:CCH52058.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
TonB-dependent outer membrane protein, SusC/RagA
qs_2_scaffold_66_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17962..19602
DNA (1641bp) protein (547aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003765509
RagB/SusD domain-containing protein
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AHG88728.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qs_2_scaffold_66_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19821..21617
DNA (1797bp) protein (599aa)
ASPIC/UnbV domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJH9_RHOM4
ASPIC/UnbV domain-containing protein
ASPIC/UnbV domain protein {ECO:0000313|EMBL:ACY48637.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sour
qs_2_scaffold_66_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21631..22740
DNA (1110bp) protein (370aa)
TPR repeat-containing protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJH2_RHOM4
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACY48630.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
qs_2_scaffold_66_13
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22787..24565
DNA (1779bp) protein (593aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00035D39B9
Uncharacterized protein {ECO:0000313|EMBL:EON76856.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacte
hypothetical protein
qs_2_scaffold_66_14
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24707..24916
DNA (210bp) protein (70aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154};
Candidate Beta-galactosidase Glycoside hydrolase family 2 n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FCG4_FLAJ1
qs_2_scaffold_66_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25008..27725
DNA (2718bp) protein (906aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJI0_RHOM4
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACY48638.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodoth
qs_2_scaffold_66_16
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

27905..28960
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000363ABE8
aryldialkylphosphatase; K07048 phosphotriesterase-related protein Tax=RBG_16_Aminicenantes_63_16_curated
aryldialkylphosphatase
qs_2_scaffold_66_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

29008..31170
DNA (2163bp) protein (721aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036671CC
Glycoside hydrolase 97
Glycoside hydrolase 97 {ECO:0000313|EMBL:AHG93159.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
qs_2_scaffold_66_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31287..33545)
DNA (2259bp) protein (753aa)
ribonuclease G n=1 Tax=Salisaeta longa RepID=UPI0003B4E465
ribonuclease
Ribonuclease, Rne/Rng family subfamily {ECO:0000313|EMBL:ABC44436.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qs_2_scaffold_66_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34434..34898
DNA (465bp) protein (155aa)
succinate dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B671E7
succinate dehydrogenase, cytochrome b556 subunit
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:ACY47114.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
qs_2_scaffold_66_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34969..35463
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEE8_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72140.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_2_scaffold_66_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

35567..37312
DNA (1746bp) protein (582aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
succinate dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B3AB57
sdhA; succinate dehydrogenase flavoprotein subunit
qs_2_scaffold_66_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

37559..38266
DNA (708bp) protein (236aa)
Succinate dehydrogenase, iron-sulfur protein {ECO:0000313|EMBL:ABC45625.1}; EC=1.3.99.1 {ECO:0000313|EMBL:ABC45625.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
Succinate dehydrogenase iron-sulfur protein n=2 Tax=Salinibacter ruber RepID=D5H631_SALRM
sdhB; succinate dehydrogenase iron-sulfur protein
qs_2_scaffold_66_23
unknown

Not on your lists

comp(38170..38364)
DNA (195bp) protein (65aa)

This feature has no annotations

qs_2_scaffold_66_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(38564..40345)
DNA (1782bp) protein (594aa)
sul1; sulfate transporter
sul1; sulfate transporter id=24658183 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sulphate transporter {ECO:0000313|EMBL:CBH25388.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qs_2_scaffold_66_25
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(40404..42371)
DNA (1968bp) protein (656aa)
Citrate/succinate, 2-oxoglutarate/malate transporter n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z078_9EURY
Citrate/succinate, 2-oxoglutarate/malate transporter {ECO:0000313|EMBL:ELY78563.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natri
di-/tricarboxylate transporter
qs_2_scaffold_66_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

43182..43454
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5H637_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23492.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_66_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

43444..44358
DNA (915bp) protein (305aa)
Beta-lactamase domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD01_RHOM4
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACY47111.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_2_scaffold_66_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

44437..45477
DNA (1041bp) protein (347aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
thiamine-monophosphate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B43924
thiL; thiamine-monophosphate kinase
qs_2_scaffold_66_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(46099..48648)
DNA (2550bp) protein (850aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B3E937
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25567.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_66_30
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

49091..52342
DNA (3252bp) protein (1084aa)
beta-galactosidase (EC:3.2.1.23)
hypothetical protein n=1 Tax=Virgibacillus halodenitrificans RepID=UPI0002D893B8
Glycoside hydrolase family protein {ECO:0000313|EMBL:ESP87025.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candid
Displaying items 1-30 of 32 in total

View Taxonomy