ggKbase home page

qs_2_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_36_1
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(3..131)
DNA (129bp) protein (43aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Cal
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI000345C45A
CRISPR-associated protein Cas2
qs_2_scaffold_36_2
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(131..1138)
DNA (1008bp) protein (336aa)
CRISPR-associated protein Cas1 n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UML5_CYAP2
CRISPR-associated protein Cas1
CRISPR-associated protein Cas1 {ECO:0000313|EMBL:ADN18195.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822
qs_2_scaffold_36_3
unknown

Not on your lists

1253..1537
DNA (285bp) protein (95aa)

This feature has no annotations

qs_2_scaffold_36_4
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1507..2088)
DNA (582bp) protein (194aa)
CRISPR-associated protein, Cas1 family (EC:2.7.7.49)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G1B8_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN56408.1}; TaxID=272129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506
qs_2_scaffold_36_5
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3105..4583
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YQJ2_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:EAW36774.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya
hypothetical protein
qs_2_scaffold_36_6
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4562..6844
DNA (2283bp) protein (761aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YQJ3_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:EAW36775.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106) (Lyngbya
hypothetical protein
qs_2_scaffold_36_7
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

6854..7831
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YQJ4_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:KIJ78715.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
qs_2_scaffold_36_8
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

7846..8622
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YQJ5_LYNSP
CRISPR-associated protein {ECO:0000313|EMBL:KIJ78714.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
CRISPR-associated RAMP Cmr4
qs_2_scaffold_36_9
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

8627..9055
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YQJ6_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:KIJ78713.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
qs_2_scaffold_36_10
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9070..10590
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YQJ9_LYNSP
Uncharacterized protein {ECO:0000313|EMBL:KKD37830.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
hypothetical protein
qs_2_scaffold_36_11
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

10784..11749
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00037C2AB3
WD40 repeat-containing protein
WD40 repeat-containing protein {ECO:0000313|EMBL:AFZ38170.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).
qs_2_scaffold_36_12
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12113..12874
DNA (762bp) protein (254aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UHW6_9CYAN
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:EGK87088.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Mic
hypothetical protein
qs_2_scaffold_36_13
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(13095..13604)
DNA (510bp) protein (170aa)
Major facilitator superfamily MFS_1 n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U396_9CYAN
MFS transporter {ECO:0000313|EMBL:KIF19451.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
major facilitator superfamily protein
qs_2_scaffold_36_14
unknown

Not on your lists

13673..13798
DNA (126bp) protein (42aa)

This feature has no annotations

qs_2_scaffold_36_15
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists


comp(13851..16307)
DNA (2457bp) protein (819aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source=
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T574_9CYAN
type IIA topoisomerase subunit A
qs_2_scaffold_36_16
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(16693..17598)
DNA (906bp) protein (302aa)
Tetratricopeptide repeat protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T7S4_9CYAN
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AFY78049.1}; Flags: Precursor;; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_2_scaffold_36_17
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

18072..18650
DNA (579bp) protein (193aa)
Putative HD superfamily hydrolase of NAD metabolism n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T6K6_9CYAN
putative HD superfamily hydrolase of NAD metabolism
Putative HD superfamily hydrolase of NAD metabolism {ECO:0000313|EMBL:AFY78160.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_2_scaffold_36_18
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18745..19203
DNA (459bp) protein (153aa)
Ribosomal silencing factor RsfS n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YCI5_HALP7
iojap family protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;
qs_2_scaffold_36_19
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

19224..19733
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI0003703B3A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY78158.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_2_scaffold_36_20
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

19792..20745
DNA (954bp) protein (318aa)
L-asparaginase II n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UHH0_CYAP2
L-asparaginase II
L-asparaginase II {ECO:0000313|EMBL:ADN12111.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
qs_2_scaffold_36_trna_1
unknown

Not on your lists

20814..20887
DNA (74bp)
transferRNA
qs_2_scaffold_36_21
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21553..23451)
DNA (1899bp) protein (633aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Dactylococcopsis salina PCC 8305 RepID=K9YY52_DACSA
glucosamine--fructose-6-phosphate aminotransferase
qs_2_scaffold_36_22
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23733..23978)
DNA (246bp) protein (82aa)
Photosystem I iron-sulfur center {ECO:0000256|HAMAP-Rule:MF_01303}; EC=1.97.1.12 {ECO:0000256|HAMAP-Rule:MF_01303};; 9 kDa polypeptide {ECO:0000256|HAMAP-Rule:MF_01303}; PSI-C {ECO:0000256|HAMAP-Rule:
Photosystem I iron-sulfur center n=9 Tax=Oscillatoriophycideae RepID=PSAC_TRIEI
photosystem I iron-sulfur protein PsaC
qs_2_scaffold_36_23
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24334..24846
DNA (513bp) protein (171aa)
Heat shock protein Hsp20 n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XLM1_9CHRO
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AFZ32979.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
qs_2_scaffold_36_24
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24889..25770)
DNA (882bp) protein (294aa)
Probable aspartoacylase {ECO:0000256|HAMAP-Rule:MF_00704}; EC=3.5.1.15 {ECO:0000256|HAMAP-Rule:MF_00704};; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea
aspartoacylase (EC:3.5.1.15) rbh
Probable aspartoacylase n=1 Tax=Moorea producens 3L RepID=F4XXZ2_9CYAN
qs_2_scaffold_36_25
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

25946..26305
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T1F2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY75991.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
qs_2_scaffold_36_26
unknown

Not on your lists

26572..26844
DNA (273bp) protein (91aa)

This feature has no annotations

qs_2_scaffold_36_27
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(26824..27831)
DNA (1008bp) protein (336aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=118163 species="B
Methionyl-tRNA formyltransferase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T3K1_9CYAN
methionyl-tRNA formyltransferase
qs_2_scaffold_36_28
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(27960..28481)
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VRC1_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX75529.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
hypothetical protein
qs_2_scaffold_36_29
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

28880..30496
DNA (1617bp) protein (539aa)
Small G protein, GTPase SAR1 n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T6J8_9CYAN
small G protein, GTPase SAR1
Small G protein, GTPase SAR1 {ECO:0000313|EMBL:AFY77741.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
Displaying items 1-30 of 56 in total

View Taxonomy