ggKbase home page

qs_2_scaffold_110

Search features with annotation key words

Displaying items 1-30 of 43 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_110_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..162)
DNA (162bp) protein (54aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGP6_RHOMR
2-isopropylmalate synthase
qs_2_scaffold_110_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(421..1629)
DNA (1209bp) protein (403aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase n=2 Tax=Salinibacter ruber RepID=LEU3_SALRD
leuB; isocitrate/isopropylmalate dehydrogenase
qs_2_scaffold_110_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1672..2709)
DNA (1038bp) protein (346aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
Ketol-acid reductoisomerase n=2 Tax=Salinibacter ruber RepID=ILVC_SALRD
ilvC; ketol-acid reductoisomerase
qs_2_scaffold_110_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3015..3548)
DNA (534bp) protein (178aa)
Acetolactate synthase, small subunit n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGP9_RHOMR
acetolactate synthase small subunit
Acetolactate synthase, small subunit {ECO:0000313|EMBL:AEN74046.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhod
qs_2_scaffold_110_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3796..5055)
DNA (1260bp) protein (420aa)
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG78_RHOM4
acetolactate synthase large subunit
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:ACY47634.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodother
qs_2_scaffold_110_6
unknown

Not on your lists

5252..5953
DNA (702bp) protein (234aa)

This feature has no annotations

qs_2_scaffold_110_7
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(6200..7264)
DNA (1065bp) protein (355aa)
aspartate/ammonia ligase (EC:6.3.1.1); K01914 aspartate--ammonia ligase [EC:6.3.1.1] Tax=CG_Aenigma_01
asnA; asparagine synthetase AsnA (EC:6.3.1.1)
asparagine synthase n=1 Tax=Salisaeta longa RepID=UPI0003B5AD57
qs_2_scaffold_110_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

8085..9293
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003736DB6
phospho-2-dehydro-3-deoxyheptonate aldolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
phospho-2-dehydro-3-deoxyheptonate aldolase
qs_2_scaffold_110_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9497..10726
DNA (1230bp) protein (410aa)
aspartate transaminase (EC:2.6.1.1)
Aspartate transaminase {ECO:0000313|EMBL:AEN72188.1}; EC=2.6.1.1 {ECO:0000313|EMBL:AEN72188.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
aspartate aminotransferase n=1 Tax=Salisaeta longa RepID=UPI0003B779E2
qs_2_scaffold_110_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10783..11916)
DNA (1134bp) protein (378aa)
Phosphate-selective porin O and P n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7A1_SALRM
phosphate-selective porin O and P
Phosphate-selective porin O and P {ECO:0000313|EMBL:CBH23906.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
qs_2_scaffold_110_11
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(12098..13180)
DNA (1083bp) protein (361aa)
putative thiosulfate sulfurtransferase (EC:2.8.1.1)
Putative thiosulfate sulfurtransferase n=1 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IIN4_PHYMF
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1142394 species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (s
qs_2_scaffold_110_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13636..14592)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7Z1_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24146.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_110_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14756..15898)
DNA (1143bp) protein (381aa)
Homoserine dehydrogenase {ECO:0000256|PIRNR:PIRNR036497}; Short=HDH {ECO:0000256|PIRNR:PIRNR036497};; EC=1.1.1.3 {ECO:0000256|PIRNR:PIRNR036497};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacter
Homoserine dehydrogenase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5A4_SALRD
bifunctional aspartokinase/homoserine dehydrogenase I
qs_2_scaffold_110_14
Absidia idahoensis, Absidia, Mucorales, Fungi

Not on your lists

comp(16062..17201)
DNA (1140bp) protein (380aa)
homoserine O-acetyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B36D77
Uncharacterized protein {ECO:0000313|EMBL:CDS11059.1}; TaxID=572092 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal lineages; Mucoromycotina; Mucorales; Cunninghamellaceae; Abs
metX; homoserine O-acetyltransferase
qs_2_scaffold_110_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17305..18681)
DNA (1377bp) protein (459aa)
O-acetylhomoserine sulfhydrylase {ECO:0000313|EMBL:CBH23480.1}; EC=2.5.1.49 {ECO:0000313|EMBL:CBH23480.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
O-acetylhomoserine sulfhydrylase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5A7_SALRD
met17; O-acetylhomoserine sulfhydrylase
qs_2_scaffold_110_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19435..20745)
DNA (1311bp) protein (437aa)
Threonine synthase {ECO:0000313|EMBL:ACY48153.1}; EC=4.2.3.1 {ECO:0000313|EMBL:ACY48153.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rho
Threonine synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI45_RHOM4
threonine synthase
qs_2_scaffold_110_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20884..21864)
DNA (981bp) protein (327aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
Homoserine kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI44_RHOM4
homoserine kinase
qs_2_scaffold_110_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22160..24664)
DNA (2505bp) protein (835aa)
aspartate kinase (EC:1.1.1.3 2.7.2.4)
Aspartate kinase {ECO:0000313|EMBL:AEN72590.1}; EC=1.1.1.3 {ECO:0000313|EMBL:AEN72590.1};; EC=2.7.2.4 {ECO:0000313|EMBL:AEN72590.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Aspartate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFY1_RHOMR
qs_2_scaffold_110_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24921..26207)
DNA (1287bp) protein (429aa)
proA; gamma-glutamyl phosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] id=24659197 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Gamma-glutamyl phosphate reductase {ECO:0000255|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000255|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000255|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogena
proA; gamma-glutamyl phosphate reductase
qs_2_scaffold_110_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26378..27460)
DNA (1083bp) protein (361aa)
Glutamate 5-kinase {ECO:0000255|HAMAP-Rule:MF_00456}; EC=2.7.2.11 {ECO:0000255|HAMAP-Rule:MF_00456};; Gamma-glutamyl kinase {ECO:0000255|HAMAP-Rule:MF_00456}; Short=GK {ECO:0000255|HAMAP-Rule:MF_00456
proB; gamma-glutamyl kinase; K00931 glutamate 5-kinase [EC:2.7.2.11] id=24659196 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
proB; gamma-glutamyl kinase
qs_2_scaffold_110_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(28236..29663)
DNA (1428bp) protein (476aa)
lpdA; dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] id=24659560 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
lpdA; dihydrolipoamide dehydrogenase
qs_2_scaffold_110_trna_2
unknown

Not on your lists

comp(29869..29944)
DNA (76bp)
transferRNA
qs_2_scaffold_110_trna_1
unknown

Not on your lists

comp(30012..30084)
DNA (73bp)
transferRNA
qs_2_scaffold_110_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30139..30996)
DNA (858bp) protein (286aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:CBH25448.1}; EC=2.3.1.51 {ECO:0000313|EMBL:CBH25448.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incerta
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Salisaeta longa RepID=UPI0003B74C35
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase
qs_2_scaffold_110_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

31249..32349
DNA (1101bp) protein (367aa)
riboflavin biosynthesis protein RibD n=1 Tax=Salisaeta longa RepID=UPI0003B30A65
ribD; riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769, ECO:0000313|EMBL:CBH25449.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
qs_2_scaffold_110_24
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32376..32957
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KFD40557.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
hypothetical protein
qs_2_scaffold_110_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

33002..33643
DNA (642bp) protein (214aa)
Riboflavin synthase alpha chain n=2 Tax=Salinibacter ruber RepID=D5HBP5_SALRM
ribE; riboflavin synthase subunit alpha
Riboflavin synthase alpha chain {ECO:0000313|EMBL:CBH25450.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qs_2_scaffold_110_26
unknown

Not on your lists

33720..34439
DNA (720bp) protein (240aa)

This feature has no annotations

qs_2_scaffold_110_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34566..36077
DNA (1512bp) protein (504aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Salisaeta longa RepID=UPI0003B3441D
miaB; 2-methylthioadenine synthetase
qs_2_scaffold_110_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

36175..36582
DNA (408bp) protein (136aa)
hypothetical protein id=24658525 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46116.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 43 in total

View Taxonomy