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qs_2_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 56 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_18_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

532..1704
DNA (1173bp) protein (391aa)
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] id=24656865 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
trmE; tRNA modification GTPase TrmE
qs_2_scaffold_18_2
unknown

Not on your lists

comp(2472..3119)
DNA (648bp) protein (216aa)

This feature has no annotations

qs_2_scaffold_18_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3154..3624
DNA (471bp) protein (157aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJF6_RHOMR
qs_2_scaffold_18_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3755..4903
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH58_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47843.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_2_scaffold_18_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4986..6107
DNA (1122bp) protein (374aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJF8_RHOMR
qs_2_scaffold_18_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6159..7349
DNA (1191bp) protein (397aa)
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=762570 species="Bacteria; Bact
Acetylornithine aminotransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJF9_RHOMR
qs_2_scaffold_18_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7349..8407
DNA (1059bp) protein (353aa)
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:AEN73832.1}; EC=2.1.3.9 {ECO:0000313|EMBL:AEN73832.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH55_RHOM4
aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein
qs_2_scaffold_18_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8485..9273
DNA (789bp) protein (263aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:00
Acetylglutamate kinase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MH54_RHOM4
acetylglutamate kinase rbh
qs_2_scaffold_18_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9397..10410
DNA (1014bp) protein (338aa)
Peptidase M20 n=2 Tax=Rhodothermus marinus RepID=D0MJ50_RHOM4
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:ACY48508.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strai
qs_2_scaffold_18_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10446..11768
DNA (1323bp) protein (441aa)
Argininosuccinate lyase {ECO:0000313|EMBL:ABC44970.1}; EC=4.3.2.1 {ECO:0000313|EMBL:ABC44970.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
Argininosuccinate lyase n=2 Tax=Salinibacter ruber RepID=D5HBG4_SALRM
argH; argininosuccinate lyase
qs_2_scaffold_18_11
unknown

Not on your lists

11765..11863
DNA (99bp) protein (33aa)

This feature has no annotations

qs_2_scaffold_18_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12101..12907)
DNA (807bp) protein (269aa)
protein PASTA domain-containing protein
protein PASTA domain-containing protein id=24658634 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
PASTA domain protein {ECO:0000313|EMBL:ABC44475.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (
qs_2_scaffold_18_13
unknown

Not on your lists

comp(12910..13701)
DNA (792bp) protein (264aa)

This feature has no annotations

qs_2_scaffold_18_16S_1
unknown

Not on your lists

13954..15480
DNA (1527bp)
qs_2_scaffold_18_trna_1
unknown

Not on your lists

15702..15776
DNA (75bp)
transferRNA
qs_2_scaffold_18_trna_2
unknown

Not on your lists

15870..15942
DNA (73bp)
transferRNA
qs_2_scaffold_18_14
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

18432..18884
DNA (453bp) protein (151aa)
Homing endonuclease n=1 Tax=uncultured Chloroflexi bacterium RepID=H5SF27_9CHLR
Homing endonuclease LAGLIDADG/HNH Tax=RBG_13_Actinobacteria_63_9_curated
Homing endonuclease LAGLIDADG/HNH
qs_2_scaffold_18_15
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(20543..20959)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI00030971BC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY56467.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
qs_2_scaffold_18_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

21185..23521
DNA (2337bp) protein (779aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
phosphoribosylformylglycinamidine synthase 2 (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEB7_RHOMR
qs_2_scaffold_18_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23806..26997)
DNA (3192bp) protein (1064aa)
WD40-like beta Propeller containing protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SE95_RHOMR
WD40-like beta propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AEN72087.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sourc
qs_2_scaffold_18_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27847..28626)
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDA3_RHOM4
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACY49015.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="R
qs_2_scaffold_18_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28773..29891
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IVV6_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:EMA50893.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_18_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30084..31205)
DNA (1122bp) protein (374aa)
Transposase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H559_SALRM
transposase
Transposase {ECO:0000313|EMBL:CBH23164.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8
qs_2_scaffold_18_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31382..34288)
DNA (2907bp) protein (969aa)
ppc; phosphoenolpyruvate carboxylase; K01595 phosphoenolpyruvate carboxylase [EC:4.1.1.31] id=24656911 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.
ppc; phosphoenolpyruvate carboxylase
qs_2_scaffold_18_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34565..35755)
DNA (1191bp) protein (397aa)
hydroxyglutarate oxidase n=1 Tax=Salisaeta longa RepID=UPI0003B75A2F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25901.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_18_23
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35837..36901)
DNA (1065bp) protein (355aa)
Capsule biosynthesis protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PM67_9DELT
Capsule biosynthesis protein {ECO:0000313|EMBL:EPX64091.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" sourc
capsule biosynthesis protein, capa family
qs_2_scaffold_18_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

37222..38337
DNA (1116bp) protein (372aa)
hypothetical protein
hypothetical protein id=24658715 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45350.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_18_25
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

38450..39268
DNA (819bp) protein (273aa)
Oxidoreductase aldo/keto reductase family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JY12_9BACT
Oxidoreductase aldo/keto reductase family {ECO:0000313|EMBL:ELR73063.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga im
aldo/keto reductase
qs_2_scaffold_18_26
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

39347..40438
DNA (1092bp) protein (364aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I {ECO:0000313|EMBL:AGY59939.1}; EC=5.99.1.2 {ECO:0000313|EMBL:AGY59939.1};; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gl
DNA topoisomerase I n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QQP3_9CYAN
qs_2_scaffold_18_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(40467..41516)
DNA (1050bp) protein (350aa)
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACY48222.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACY48222.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Transcriptional regulator, LacI family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGB3_RHOMR
LacI family transcriptional regulator
Displaying items 1-30 of 56 in total

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