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qs_2_scaffold_37

Search features with annotation key words

Displaying items 1-30 of 37 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_37_1
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1327
DNA (1326bp) protein (442aa)
Phospholipase D, putative n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GD73_ACACA
phospholipase D, putative Tax=RBG_16_Deltaproteobacteria_71_12_curated
hypothetical protein
qs_2_scaffold_37_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1496..2200
DNA (705bp) protein (235aa)
OmpA family protein
OmpA family protein id=24658640 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
OmpA family protein {ECO:0000313|EMBL:ABC46032.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_2_scaffold_37_3
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2265..3404
DNA (1140bp) protein (380aa)
Putative permease n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GWE2_9GAMM
permease
Putative permease {ECO:0000313|EMBL:AGA90306.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 83
qs_2_scaffold_37_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3630..4640)
DNA (1011bp) protein (337aa)
serine/threonine protein kinase (EC:2.7.11.18); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
qs_2_scaffold_37_5
unknown

Not on your lists

comp(5067..6119)
DNA (1053bp) protein (351aa)

This feature has no annotations

qs_2_scaffold_37_6
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6331..6936
DNA (606bp) protein (202aa)
DSBA oxidoreductase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF55_9BACT
Transporter {ECO:0000313|EMBL:KDE58902.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
qs_2_scaffold_37_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7115..9724)
DNA (2610bp) protein (870aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGP6_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY49609.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_2_scaffold_37_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9914..10372
DNA (459bp) protein (153aa)
MaoC family dehydratase n=1 Tax=Salisaeta longa RepID=UPI0003B70B2B
maoC; phosphate acetyltransferase
Putative phosphate acetyltransferase/enoyl-CoA hydratase fusion protein {ECO:0000313|EMBL:ABC46333.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
qs_2_scaffold_37_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11033..12592)
DNA (1560bp) protein (520aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4N5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22990.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_37_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12808..13989)
DNA (1182bp) protein (394aa)
DNA replication and repair protein RecF n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4N4_SALRM
recF; DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodoth
qs_2_scaffold_37_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14357..17134
DNA (2778bp) protein (926aa)
Tetratricopeptide repeat domain protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S6G2_SALRD
hypothetical protein
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:ABC43578.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qs_2_scaffold_37_12
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17463..17870)
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:ACK67465.1}; TaxID=41431 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synec
qs_2_scaffold_37_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18127..21552
DNA (3426bp) protein (1142aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=309807 species="Bacteria; Ba
transcription-repair coupling factor n=1 Tax=Salisaeta longa RepID=UPI0003B5D585
mfd; transcription-repair coupling factor
qs_2_scaffold_37_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

21803..22042
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B69DBB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein
qs_2_scaffold_37_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

22076..22486
DNA (411bp) protein (137aa)
DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B2EE86
nucleic acid-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nucleic acid-binding protein, contains PIN domain
qs_2_scaffold_37_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22947..23714
DNA (768bp) protein (256aa)
DNA repair protein RadC n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFA0_RHOM4
DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:ACY49356.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_2_scaffold_37_17
unknown

Not on your lists

comp(23746..24879)
DNA (1134bp) protein (378aa)

This feature has no annotations

qs_2_scaffold_37_18
unknown

Not on your lists

comp(24998..25615)
DNA (618bp) protein (206aa)

This feature has no annotations

qs_2_scaffold_37_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


25727..27163
DNA (1437bp) protein (479aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S046_SALRD
glyS; glycyl-tRNA synthetase
qs_2_scaffold_37_20
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27153..27488
DNA (336bp) protein (112aa)
Beta-lactamase-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUU2_KORVE
Metallo-beta-lactamase {ECO:0000313|EMBL:AKE52741.1}; Flags: Precursor;; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="
beta-lactamase-like protein
qs_2_scaffold_37_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27528..29234)
DNA (1707bp) protein (569aa)
Putative metallopeptidase n=2 Tax=Salinibacter ruber RepID=D5HAH1_SALRM
metallopeptidase
Putative metallopeptidase {ECO:0000313|EMBL:CBH25026.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ru
qs_2_scaffold_37_22
unknown

Not on your lists

29472..29657
DNA (186bp) protein (62aa)

This feature has no annotations

qs_2_scaffold_37_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29862..31169)
DNA (1308bp) protein (436aa)
GTP-binding protein Der n=1 Tax=Salisaeta longa RepID=UPI0003B2F5CD
small GTP-binding protein
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Or
qs_2_scaffold_37_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31353..32168)
DNA (816bp) protein (272aa)
ABC transporter substrate-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B79D98
ABC transporter substrate-binding protein
Putative ABC transporter (Substrate-binding protein) {ECO:0000313|EMBL:CBH23338.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter
qs_2_scaffold_37_25
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32314..33117)
DNA (804bp) protein (268aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG17_RHOM4
UDP-diphosphatase
qs_2_scaffold_37_26
unknown

Not on your lists

comp(33277..33642)
DNA (366bp) protein (122aa)

This feature has no annotations

qs_2_scaffold_37_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33874..35811)
DNA (1938bp) protein (646aa)
Lipid A export ATP-binding/permease protein msbA n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD69_SALRM
msbA; Lipid A export ATP-binding/permease protein msbA
Lipid A export ATP-binding/permease protein msbA {ECO:0000313|EMBL:CBH25974.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;"
qs_2_scaffold_37_28
unknown

Not on your lists

36039..36344
DNA (306bp) protein (102aa)

This feature has no annotations

qs_2_scaffold_37_29
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

36352..36750
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002EDE07E
hypothetical protein; K07341 death on curing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
death-on-curing family protein
qs_2_scaffold_37_30
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

36973..39048
DNA (2076bp) protein (692aa)
peptidase n=1 Tax=Salisaeta longa RepID=UPI0003B4257D
peptidase
Peptidase {ECO:0000313|EMBL:AEN73699.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-
Displaying items 1-30 of 37 in total

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