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qs_2_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 81 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_38_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2..724)
DNA (723bp) protein (241aa)
iron ABC transporter substrate-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B7AEAC
extracellular solute-binding protein
Bacterial extracellular solute-binding protein, putative {ECO:0000313|EMBL:ABC45617.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Saliniba
qs_2_scaffold_38_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

860..2437
DNA (1578bp) protein (526aa)
Amino acid transporter n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7Y6_SALRM
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:CBH24141.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber
qs_2_scaffold_38_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2469..3140
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H7Y5_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24140.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_38_4
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3222..3755
DNA (534bp) protein (178aa)
Appr-1-p processing protein n=1 Tax=Salisaeta longa RepID=UPI0003B7146F
Uncharacterized protein {ECO:0000313|EMBL:EPC01056.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticarie
Appr-1-p processing
qs_2_scaffold_38_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3821..4324)
DNA (504bp) protein (168aa)
Acetyltransferase, GNAT family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD32_SALRM
GNAT family acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:CBH25937.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_2_scaffold_38_6
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4399..6183)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YG60_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP41848.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
qs_2_scaffold_38_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6554..7861)
DNA (1308bp) protein (436aa)
membrane dipeptidase (EC:3.4.13.19) rbh
Membrane dipeptidase {ECO:0000313|EMBL:ACY47724.1}; EC=3.4.13.19 {ECO:0000313|EMBL:ACY47724.1};; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
Membrane dipeptidase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGT9_RHOM4
qs_2_scaffold_38_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7986..9617
DNA (1632bp) protein (544aa)
Na+/H+ antiporter family n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3G8_SALRD
Na(+)/H(+) antiporter family protein
Na+/H+ antiporter family {ECO:0000313|EMBL:ABC45613.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_2_scaffold_38_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9764..10945
DNA (1182bp) protein (394aa)
Peptidase S58 DmpA n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL16_RHOMR
peptidase S58 DmpA
Peptidase S58 DmpA {ECO:0000313|EMBL:AEN74309.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rho
qs_2_scaffold_38_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11022..12836
DNA (1815bp) protein (605aa)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ABC46173.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ABC46173.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
Gamma-glutamyltransferase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZ73_SALRD
ggt; gamma-glutamyltransferase
qs_2_scaffold_38_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12847..13815
DNA (969bp) protein (323aa)
Oxidoreductase domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIG9_RHOMR
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEN74445.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermu
qs_2_scaffold_38_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13872..14894
DNA (1023bp) protein (341aa)
Putative stomatin-like transmembrane protein {ECO:0000313|EMBL:CBH24846.1}; EC=3.4.-.- {ECO:0000313|EMBL:CBH24846.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
SPFH domain-containing protein
HflC; stomatin-like transmembrane protein id=24659680 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_2_scaffold_38_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(14897..15286)
DNA (390bp) protein (130aa)
Uncharacterized protein id=4956288 bin=GWC2_Methylomirabilis_70_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein Tax=GWC2_Rokubacteria_70_16_curated
hypothetical protein
qs_2_scaffold_38_14
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(15283..15573)
DNA (291bp) protein (97aa)
DNA polymerase beta domain-containing protein region Tax=RBG_16_Chloroflexi_57_11_curated
DNA polymerase, beta-like region id=3296181 bin=GWF2_Planctomycete_41_51 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
putative nucleotidyltransferase
qs_2_scaffold_38_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15718..17391
DNA (1674bp) protein (558aa)
tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZU6_SALRD
tRNA nucleotidyltransferase/poly(A) polymerase family protein
tRNA nucleotidyltransferase/poly(A) polymerase family protein {ECO:0000313|EMBL:ABC44440.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sal
qs_2_scaffold_38_16
unknown

Not on your lists

17403..17534
DNA (132bp) protein (44aa)

This feature has no annotations

qs_2_scaffold_38_17
Vibrio ichthyoenteri, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17710..17883
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Vibrio sp. 16 RepID=B8K423_9VIBR
Membrane protein {ECO:0000313|EMBL:KIE22683.1}; TaxID=142461 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio ichthyoenteri.;"
hypothetical protein
qs_2_scaffold_38_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17935..18447)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5B16A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC46221.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_38_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18565..19554)
DNA (990bp) protein (330aa)
glycine betaine ABC transporter glycine betaine-binding protein; K02002 glycine betaine/proline transport system substrate-binding protein id=24657283 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
ABC transporter substrate-binding protein
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:ABC44107.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_2_scaffold_38_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19647..20540)
DNA (894bp) protein (298aa)
proline/glycine betaine ABC transporter permease; K02001 glycine betaine/proline transport system permease protein id=24657282 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
proline/glycine betaine ABC transporter permease
ABC-type proline/glycine betaine transport system, permease component {ECO:0000313|EMBL:CBH23430.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermac
qs_2_scaffold_38_21
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20659..22083)
DNA (1425bp) protein (475aa)
Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC:3.6.3.32)
Salinispira pacifica strain L21-RPul-D2, complete genome {ECO:0000313|EMBL:AHC16767.1}; EC=3.6.3.32 {ECO:0000313|EMBL:AHC16767.1};; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spiro
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003817271
qs_2_scaffold_38_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

22476..23027
DNA (552bp) protein (184aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
phosphoesterase
phosphoesterase; K07095 id=24657865 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_2_scaffold_38_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

23220..24080
DNA (861bp) protein (287aa)
Deoxyadenosine kinase {ECO:0000313|EMBL:AEN74238.1}; EC=2.7.1.76 {ECO:0000313|EMBL:AEN74238.1};; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedi
deoxynucleoside kinase n=1 Tax=Salisaeta longa RepID=UPI0003B3D3C1
deoxynucleoside kinase
qs_2_scaffold_38_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24085..26280
DNA (2196bp) protein (732aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8L9_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24374.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_38_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26463..27479
DNA (1017bp) protein (339aa)
epimerase/reductase
epimerase/reductase id=24657234 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Epimerase/reductase, putative {ECO:0000313|EMBL:CBH23380.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_2_scaffold_38_26
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

27538..28791
DNA (1254bp) protein (418aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M4M1_9CYAN
qs_2_scaffold_38_trna_1
unknown

Not on your lists

28896..28969
DNA (74bp)
transferRNA
qs_2_scaffold_38_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29375..31441
DNA (2067bp) protein (689aa)
UvrABC system protein B n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8A7_SALRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_0
uvrB; UvrABC system protein B
qs_2_scaffold_38_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(31758..33674)
DNA (1917bp) protein (639aa)
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|
Aspartate--tRNA ligase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=SYD_SALRD
aspS; aspartyl-tRNA synthetase
qs_2_scaffold_38_29
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

34069..35925
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003639D80
amino acid/peptide transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:AEN74241.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodotherm
Displaying items 1-30 of 81 in total

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