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qs_2_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 143 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_5_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1..315)
DNA (315bp) protein (105aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206, ECO:0000313|EMBL:CBH23895.1}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|
Lipoyl synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H790_SALRM
lipA; lipoyl synthase
qs_2_scaffold_5_2
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

525..857
DNA (333bp) protein (111aa)
Putative cell wall-associated protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZXI9_9BACT
Rhs family protein precursor Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
hypothetical protein
qs_2_scaffold_5_3
unknown

Not on your lists

847..1233
DNA (387bp) protein (129aa)

This feature has no annotations

qs_2_scaffold_5_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

1287..2699
DNA (1413bp) protein (471aa)
Acetylornithine aminotransferase {ECO:0000313|EMBL:CBH23898.1}; EC=2.6.1.11 {ECO:0000313|EMBL:CBH23898.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodo
L-lysine aminotransferase n=1 Tax=Salisaeta longa RepID=UPI0003B3F32B
argD; Acetylornithine aminotransferase
qs_2_scaffold_5_5
Gloeocapsa sp. PCC 73106, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3181..4935
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LVD4_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:ELR99941.1}; TaxID=102232 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 73106.;"
pkd domain containing protein
qs_2_scaffold_5_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(5059..9123)
DNA (4065bp) protein (1355aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CBH25346.1}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CBH25346.1};; TaxID=761659 species="Bacteria; Bacter
DNA gyrase subunit A n=2 Tax=Salinibacter ruber RepID=D5HBE1_SALRM
gyrA; DNA gyrase subunit A
qs_2_scaffold_5_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9451..10383
DNA (933bp) protein (311aa)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:CBH23583.1}; EC=3.1.4.46 {ECO:0000313|EMBL:CBH23583.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae s
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6C8_SALRM
glpQ; glycerophosphoryl diester phosphodiesterase
qs_2_scaffold_5_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10514..12895
DNA (2382bp) protein (794aa)
TonB-dependent receptor plug n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJD0_RHOMR
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEN73802.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_2_scaffold_5_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13037..13996
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJC9_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN73801.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_2_scaffold_5_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14450..15835
DNA (1386bp) protein (462aa)
Trehalose-6-phosphate synthase domain, putative {ECO:0000313|EMBL:CBH23581.1}; EC=2.4.1.15 {ECO:0000313|EMBL:CBH23581.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
alpha,alpha-trehalose-phosphate synthase n=1 Tax=Salisaeta longa RepID=UPI0003B68483
otsA; Trehalose-6-phosphate synthase domain
qs_2_scaffold_5_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15847..16683
DNA (837bp) protein (279aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Trehalose-phosphatase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S520_SALRD
otsB; trehalose-phosphatase
qs_2_scaffold_5_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16680..17927
DNA (1248bp) protein (416aa)
Rhodanese domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MHB9_RHOM4
rhodanese domain-containing protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
qs_2_scaffold_5_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18138..18536
DNA (399bp) protein (133aa)
Fe-S metabolism protein SufE n=1 Tax=Salisaeta longa RepID=UPI0003B66E19
Fe-S metabolism associated SufE
Fe-S metabolism associated SufE {ECO:0000313|EMBL:AEN73796.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_2_scaffold_5_14
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18753..19469
DNA (717bp) protein (239aa)
Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGA6_9BACT
Response regulator receiver domain protein {ECO:0000313|EMBL:EDY83134.1}; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG
two component LuxR family transcriptional regulator
qs_2_scaffold_5_15
unknown

Not on your lists

19574..19699
DNA (126bp) protein (42aa)

This feature has no annotations

qs_2_scaffold_5_16
Burkholderia phymatum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19889..23644
DNA (3756bp) protein (1252aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=391038 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Bur
chemotaxis protein n=1 Tax=Burkholderia ubonensis RepID=UPI00016A2A78
signal transduction histidine kinase with CheB and CheR activity
qs_2_scaffold_5_17
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23688..24365
DNA (678bp) protein (226aa)
pas/pac sensor protein id=4610784 bin=GWF2_Bacteroidetes_33_38 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
PAS domain-containing protein Tax=GWF2_Bacteroidetes_33_38_curated
qs_2_scaffold_5_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24416..25096)
DNA (681bp) protein (227aa)
NUDIX hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B39127
NUDIX family hydrolase
Hydrolase, NUDIX family protein {ECO:0000313|EMBL:ABC43664.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibac
qs_2_scaffold_5_19
unknown

Not on your lists

25260..25532
DNA (273bp) protein (91aa)

This feature has no annotations

qs_2_scaffold_5_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25403..25861)
DNA (459bp) protein (153aa)
heat shock protein Hsp20 n=1 Tax=Salisaeta longa RepID=UPI0003B415E9
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AEN73791.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
qs_2_scaffold_5_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26202..27479)
DNA (1278bp) protein (426aa)
Fumarylacetoacetase {ECO:0000313|EMBL:ABC44944.1}; EC=3.7.1.2 {ECO:0000313|EMBL:ABC44944.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
fumarylacetoacetase n=1 Tax=Salisaeta longa RepID=UPI0003B4FC69
fahA; Fumarylacetoacetate (FAA) hydrolase
qs_2_scaffold_5_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27629..28699)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HBU8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25503.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_5_23
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28983..30230
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B61C3B
hypothetical protein
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEN73790.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermace
qs_2_scaffold_5_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

30461..31687
DNA (1227bp) protein (409aa)
cystathionine beta-lyase n=1 Tax=Salisaeta longa RepID=UPI0003B75F37
Cys/Met metabolism PLP-dependent enzyme superfamily protein
Cys/Met metabolism PLP-dependent enzyme superfamily {ECO:0000313|EMBL:ABC45418.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
qs_2_scaffold_5_25
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(31719..32183)
DNA (465bp) protein (155aa)
hypothetical protein
hypothetical protein id=24658307 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC45648.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_5_26
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

32617..33411
DNA (795bp) protein (265aa)
TonB family protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SDN0_RHOMR
TonB family protein {ECO:0000313|EMBL:AEN72400.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus
tonB; TonB protein
qs_2_scaffold_5_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(33573..35795)
DNA (2223bp) protein (741aa)
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit {ECO:0000313|EMBL:CBH23588.1}; EC=1.2.4.1 {ECO:0000313|EMBL:CBH23588.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroide
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6D3_SALRM
acoA_pdhA; 2-oxoisovalerate dehydrogenase, E1 component subunits alpha and beta
qs_2_scaffold_5_28
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(36394..38166)
DNA (1773bp) protein (591aa)
Serine protease / subtilase peptidase {ECO:0000313|EMBL:CBH23572.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBH23572.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Serine protease / subtilase peptidase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6B7_SALRM
Serine protease / subtilase peptidase
qs_2_scaffold_5_29
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(38326..39786)
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Sensor kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6D2_SALRM
Sensor kinase
qs_2_scaffold_5_30
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(39930..40652)
DNA (723bp) protein (241aa)
hisitidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B4C9E1
drrA; response regulator DrrA
Response regulator DrrA {ECO:0000313|EMBL:ABC46239.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
Displaying items 1-30 of 143 in total

View Taxonomy