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qs_2_scaffold_96

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_96_1
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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1..597
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6KZH3_9ACTO
Hypothetical Protein
Uncharacterized protein {ECO:0000313|EMBL:AHY47489.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubroba
qs_2_scaffold_96_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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953..1600
DNA (648bp) protein (216aa)
cytochrome C n=1 Tax=Salisaeta longa RepID=UPI0003B4CD1E
Cytochrome c3 {ECO:0000313|EMBL:ABV55244.1}; TaxID=29549 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (Rhodot
cytochrome c family protein
qs_2_scaffold_96_3

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1692..5303
DNA (3612bp) protein (1204aa)
hmoA; molybdopterin oxidoreductase, iron-sulfur binding subunit (EC:1.2.7.-)
Molybdopterin oxidoreductase, iron-sulfur binding subunit n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0LBY8_ZOBGA
Uncharacterized protein {ECO:0000313|EMBL:KKM61206.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
qs_2_scaffold_96_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5454..7019
DNA (1566bp) protein (522aa)
Probable molybdopterin oxidoreductase, membrane subunit {ECO:0000313|EMBL:CBH25245.1}; EC=1.2.7.- {ECO:0000313|EMBL:CBH25245.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II.
Fe-S-cluster-containing hydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B51F88
molybdopterin oxidoreductase, membrane subunit
qs_2_scaffold_96_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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7104..7898
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5F785
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC45987.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_96_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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8057..9199
DNA (1143bp) protein (381aa)
quinol:cytochrome C oxidoreductase n=1 Tax=Salisaeta longa RepID=UPI0003B6FAA8
quinol:cytochrome c oxidoreductase monoheme cytochrome subunit
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit {ECO:0000313|EMBL:ACY47131.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
qs_2_scaffold_96_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9252..10538
DNA (1287bp) protein (429aa)
membrane protein n=1 Tax=Salisaeta longa RepID=UPI0003B4626E
molybdopterin oxidoreductase, membrane subunit
Probable molybdopterin oxidoreductase, membrane subunit {ECO:0000313|EMBL:CBH25242.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibac
qs_2_scaffold_96_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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11110..12078
DNA (969bp) protein (323aa)
hypothetical protein
hypothetical protein id=24658038 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25241.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_96_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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12210..13172
DNA (963bp) protein (321aa)
Electron transport protein SCO1/SenC n=2 Tax=Rhodothermus marinus RepID=D0MDE1_RHOM4
electron transport protein SCO1/SenC
Electron transport protein SCO1/SenC {ECO:0000313|EMBL:ACY47134.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodother
qs_2_scaffold_96_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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13241..14230
DNA (990bp) protein (330aa)
Cytochrome c oxidase subunit 2; EC=1.9.3.1 {ECO:0000313|EMBL:CBH25240.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" sourc
cytochrome C oxidase subunit II n=1 Tax=Salisaeta longa RepID=UPI0003B35A53
ctaC; cytochrome c oxidase subunit II
qs_2_scaffold_96_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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14507..16312
DNA (1806bp) protein (602aa)
Cytochrome oxidase subunit I {ECO:0000313|EMBL:ABC44742.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ABC44742.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherm
cytochrome C oxidase subunit I n=1 Tax=Salisaeta longa RepID=UPI0003B423FA
ctaD; cytochrome c oxidase subunit I
qs_2_scaffold_96_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16421..17170
DNA (750bp) protein (250aa)
Cytochrome c oxidase subunit 3 {ECO:0000313|EMBL:CBH25238.1}; EC=1.9.3.1 {ECO:0000313|EMBL:CBH25238.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
cytochrome oxidase subunit III n=1 Tax=Salisaeta longa RepID=UPI0003B48837
ctaE; cytochrome c oxidase subunit 3
qs_2_scaffold_96_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17252..17788
DNA (537bp) protein (179aa)
oxidase n=1 Tax=Salisaeta longa RepID=UPI0003B5D369
ctaF; cytochrome oxidase subunit IV
Caa(3)-type oxidase, subunit IV subfamily, putative {ECO:0000313|EMBL:ABC44967.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.
qs_2_scaffold_96_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17964..18257
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B64649
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25236.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_96_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18363..19319
DNA (957bp) protein (319aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis
Methylenetetrahydrofolate reductase n=2 Tax=Salinibacter ruber RepID=D5HB29_SALRM
metF; 5,10-methylenetetrahydrofolate reductase
qs_2_scaffold_96_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(19698..20018)
DNA (321bp) protein (107aa)
ribose phosphate pyrophosphokinase n=1 Tax=Salisaeta longa RepID=UPI0003B30B61
yfiA; ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:ABC44215.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salin
qs_2_scaffold_96_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(20174..20629)
DNA (456bp) protein (152aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=762570 species="Bacteria; Ba
Endoribonuclease YbeY n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEH6_RHOMR
metalloprotease ybeY
qs_2_scaffold_96_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(20692..21138)
DNA (447bp) protein (149aa)
Conserved domain protein n=2 Tax=Salinibacter ruber RepID=Q2S0T4_SALRD
cspD; cold-shock protein
Conserved domain protein {ECO:0000313|EMBL:ABC44050.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rub
qs_2_scaffold_96_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(21309..24392)
DNA (3084bp) protein (1028aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEH7_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72169.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_2_scaffold_96_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(24404..24970)
DNA (567bp) protein (189aa)
BLUF domain protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAY1_9BACT
bLUF domain protein
BLUF domain protein {ECO:0000313|EMBL:CBK40390.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
qs_2_scaffold_96_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25173..25844)
DNA (672bp) protein (224aa)
methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=24658025 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
tetrapyrrole methylase family protein
qs_2_scaffold_96_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(25897..27594)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HB21_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH25226.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_2_scaffold_96_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27633..28292
DNA (660bp) protein (220aa)
beta-lactamase n=1 Tax=Salisaeta longa RepID=UPI0003B5D03F
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:ABC44417.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qs_2_scaffold_96_24
unknown

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28563..28946
DNA (384bp) protein (128aa)

This feature has no annotations

qs_2_scaffold_96_25
unknown

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28950..29177
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 25 items

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