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qs_2_scaffold_3844

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_3844_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..202
DNA (201bp) protein (67aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=2 Tax=Salinibacter ruber RepID=D5H5U9_SALRM
lepA; GTP-binding protein LepA
qs_2_scaffold_3844_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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635..2017
DNA (1383bp) protein (461aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Tryptophan synthase beta chain n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI76_RHOM4
pyridoxal-phosphate dependent TrpB-like protein
qs_2_scaffold_3844_3
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2102..3295)
DNA (1194bp) protein (398aa)
endo-1,4-beta-xylanase (EC:3.2.1.8)
Endo-1,4-beta-xylanase, family GH5 {ECO:0000313|EMBL:CAZ97654.1}; EC=3.2.1.8 {ECO:0000313|EMBL:CAZ97654.1};; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacter
Endo-1,4-beta-xylanase, family GH5 n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L8L2_ZOBGA
qs_2_scaffold_3844_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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comp(3891..4757)
DNA (867bp) protein (289aa)
Helix-hairpin-helix DNA-binding, class 1 n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A9044 id=5225078 bin=16ft_combo_ws3_JS1 species=Burkholderia oklahomensis genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
dpbF; DNA polymerase domain-containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
DNA polymerase domain-containing protein
Displaying 4 items

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