ggKbase home page

qs_2_scaffold_195

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_195_1
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..297
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1J9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR51098.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
qs_2_scaffold_195_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

443..1402
DNA (960bp) protein (320aa)
Phosphoglycerate dehydrogenase n=2 Tax=Haladaptatus paucihalophilus RepID=E7QVI0_9EURY
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EFW91502.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucih
serA4; phosphoglycerate dehydrogenase
qs_2_scaffold_195_3
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1719..2723
DNA (1005bp) protein (335aa)
Putative esterase n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N2W7_KITSK
putative esterase
Putative esterase {ECO:0000313|EMBL:BAJ32501.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 /
qs_2_scaffold_195_4
unknown

Not on your lists

2897..3580
DNA (684bp) protein (228aa)

This feature has no annotations

qs_2_scaffold_195_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3636..4169
DNA (534bp) protein (178aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M171_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:EMA38130.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
glycoside hydrolase 15-like protein
qs_2_scaffold_195_6
unknown

Not on your lists

4208..4399
DNA (192bp) protein (64aa)

This feature has no annotations

qs_2_scaffold_195_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4418..5545
DNA (1128bp) protein (376aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DH65_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:ELZ33494.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
glycoside hydrolase 15-like protein
qs_2_scaffold_195_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5696..6352)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZ72_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51002.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
NAD-dependent epimerase/dehydratase
qs_2_scaffold_195_9
unknown

Not on your lists

comp(6587..6796)
DNA (210bp) protein (70aa)

This feature has no annotations

qs_2_scaffold_195_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6857..6964
DNA (108bp) protein (36aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA49540.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qs_2_scaffold_195_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7143..8126)
DNA (984bp) protein (328aa)
Aldo/keto reductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGY7_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:EMA44976.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
aldo/keto reductase
qs_2_scaffold_195_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8276..10441)
DNA (2166bp) protein (722aa)
PfkB domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI12_9EURY
PfkB domain-containing protein {ECO:0000313|EMBL:EMA44978.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
sugar kinase
qs_2_scaffold_195_13
unknown

Not on your lists

10544..11113
DNA (570bp) protein (190aa)

This feature has no annotations

qs_2_scaffold_195_14
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11368..12489)
DNA (1122bp) protein (374aa)
Oxidoreductase domain-containing protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BHA0_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:ELZ10235.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
putative dehydrogenase
qs_2_scaffold_195_15
unknown

Not on your lists

comp(13331..13585)
DNA (255bp) protein (85aa)

This feature has no annotations

qs_2_scaffold_195_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13718..14686)
DNA (969bp) protein (323aa)
apl; AP-endonuclease/AP-lyase (EC:3.1.21.2 4.2.99.18)
AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGZ3_9EURY
AP-endonuclease/AP-lyase/xylose isomerase domain-containing protein {ECO:0000313|EMBL:EMA44981.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
qs_2_scaffold_195_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14848..15852)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGY5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44982.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_2_scaffold_195_18
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16131..16334)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IF91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ94119.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
qs_2_scaffold_195_19
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

16813..17532
DNA (720bp) protein (240aa)
NmrA family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CS94_TRURR
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ADI13626.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 1
qs_2_scaffold_195_20
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17614..18015
DNA (402bp) protein (134aa)
HxlR family transcriptional regulator n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HD90_9EURY
HxlR family transcriptional regulator {ECO:0000313|EMBL:ELZ81039.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans
HxlR family transcriptional regulator
qs_2_scaffold_195_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18146..18778)
DNA (633bp) protein (211aa)
3-beta hydroxysteroid dehydrogenase/isomerase n=1 Tax=Halorhodospira halophila (strain DSM 244 / SL1) RepID=A1WVI7_HALHL
3-beta hydroxysteroid dehydrogenase/isomerase
putative NADH-flavin reductase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
qs_2_scaffold_195_22
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18901..20082)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PM60_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ05320.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_2_scaffold_195_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20401..20727
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M494_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40627.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_2_scaffold_195_24
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21483..23159
DNA (1677bp) protein (559aa)
Radical SAM protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NXB1_9EURY
Radical SAM protein {ECO:0000313|EMBL:EMA62567.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
radical SAM protein
qs_2_scaffold_195_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23397..23816
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6B4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41241.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
Protein of unknown function (DUF3054)
qs_2_scaffold_195_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23967..25394)
DNA (1428bp) protein (476aa)
Sugar phosphate permease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N455_9EURY
Sugar phosphate permease {ECO:0000313|EMBL:EMA52646.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
putative sugar transporter
qs_2_scaffold_195_27
unknown

Not on your lists

25634..25765
DNA (132bp) protein (44aa)

This feature has no annotations

qs_2_scaffold_195_28
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26757..28586
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2V5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39996.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_2_scaffold_195_29
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28621..29736
DNA (1116bp) protein (372aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N001_9EURY
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:EMA50878.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
phospholipase D
Displaying 29 items

View Taxonomy