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qs_2_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_21_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..1017)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NHJ1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56574.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_2_scaffold_21_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1014..1874)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NIT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56575.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_2_scaffold_21_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2004..2663
DNA (660bp) protein (220aa)
CRISPR-associated DNA-binding Csa3 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFG9_9EURY
CRISPR-associated DNA-binding Csa3 {ECO:0000313|EMBL:EMA56576.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thail
CRISPR locus-related DNA-binding protein
qs_2_scaffold_21_4
unknown

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comp(4278..5591)
DNA (1314bp) protein (438aa)

This feature has no annotations

qs_2_scaffold_21_5

Not on your lists

6173..6598
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4Y0S3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS04522.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
tautomerase
qs_2_scaffold_21_6
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6710..8092
DNA (1383bp) protein (461aa)
TraB family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4R9_HALJB
TraB family protein
TraB family protein {ECO:0000313|EMBL:ADJ15536.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
qs_2_scaffold_21_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8250..8879
DNA (630bp) protein (210aa)
Peptidase M50 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M4Z1_HALMO
Peptidase M50 {ECO:0000313|EMBL:EMA40458.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
peptidase M50
qs_2_scaffold_21_8
unknown

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comp(9015..9233)
DNA (219bp) protein (73aa)

This feature has no annotations

qs_2_scaffold_21_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9571..10632
DNA (1062bp) protein (354aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DHJ3_9EURY
qs_2_scaffold_21_10
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10965..11462)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3T4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13425.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_2_scaffold_21_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11577..12032
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M7H4_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA40325.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_2_scaffold_21_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12504..13058)
DNA (555bp) protein (185aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Halogranum salarium B-1 RepID=J3JHT0_9EURY
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:EJN61246.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranu
methylase
qs_2_scaffold_21_13

Not on your lists

comp(13376..14599)
DNA (1224bp) protein (408aa)
Arabinose efflux permease n=1 Tax=uncultured archaeon A07HR60 RepID=V4XPY2_9ARCH
Arabinose efflux permease {ECO:0000313|EMBL:ESS10564.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sugar transporter
qs_2_scaffold_21_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15148..15579)
DNA (432bp) protein (144aa)
Ntp pyrophosphohydrolase n=1 Tax=Halogranum salarium B-1 RepID=J2ZL60_9EURY
Ntp pyrophosphohydrolase {ECO:0000313|EMBL:EJN61480.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
NUDIX hydrolase
qs_2_scaffold_21_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15710..16483)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44210.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_2_scaffold_21_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16480..17949)
DNA (1470bp) protein (490aa)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:00
Protoheme IX farnesyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MU79_9EURY
ctaB; heme synthase
qs_2_scaffold_21_17
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18126..18995
DNA (870bp) protein (290aa)
coxB_1; cytochrome-c-like terminal oxidase, subunit II 1 (EC:1.9.3.1)
Cytochrome c oxidase subunit II n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1L6_9EURY
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:EMA51428.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailand
qs_2_scaffold_21_18
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19179..21038
DNA (1860bp) protein (620aa)
ATP-dependent DNA ligase I (EC:6.5.1.1); K10747 DNA ligase 1 [EC:6.5.1.1] id=24643433 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
lig; DNA ligase (ATP) (EC:6.5.1.1)
qs_2_scaffold_21_19
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21134..22165
DNA (1032bp) protein (344aa)
mRNA 3'-end processing factor n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWR2_9EURY
mRNA 3'-end processing factor {ECO:0000313|EMBL:ELY53919.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
hypothetical protein
qs_2_scaffold_21_20
unknown

Not on your lists

comp(22342..22503)
DNA (162bp) protein (54aa)

This feature has no annotations

qs_2_scaffold_21_trna_1
unknown

Not on your lists

comp(22840..22912)
DNA (73bp)
transferRNA
qs_2_scaffold_21_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23211..23501
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCV3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54919.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_21_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23592..24797
DNA (1206bp) protein (402aa)
coxC; cox-type terminal oxidase subunit III (EC:1.9.3.-)
Cox-type terminal oxidase subunit III n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXZ8_9EURY
Cox-type terminal oxidase subunit III {ECO:0000313|EMBL:EMA49300.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
qs_2_scaffold_21_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25360..27453
DNA (2094bp) protein (698aa)
MCM family protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7L0_9EURY
MCM family protein {ECO:0000313|EMBL:EMA40584.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
MCM family protein
qs_2_scaffold_21_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27676..28542)
DNA (867bp) protein (289aa)
Transcription initiation factor IIB n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5B3_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
transcription initiation factor iib (tfiib)
qs_2_scaffold_21_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28767..29195)
DNA (429bp) protein (143aa)
Histidine triad protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBI0_9EURY
Histidine triad protein {ECO:0000313|EMBL:EMA54923.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
histidine triad (HIT) protein
qs_2_scaffold_21_26

Not on your lists

comp(29278..29964)
DNA (687bp) protein (229aa)
2-haloalkanoic acid dehalogenase, type II n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3J4_9ARCH
2-haloalkanoic acid dehalogenase, type II {ECO:0000313|EMBL:ESS05587.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
haloacid dehalogenase, type II
qs_2_scaffold_21_27
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30241..31512
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JFJ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59319.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative xylanase/chitin deacetylase
qs_2_scaffold_21_28
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31675..32427
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J728_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15981.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_2_scaffold_21_29
unknown

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comp(32551..33111)
DNA (561bp) protein (187aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

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