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qs_2_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_3_1
unknown

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

qs_2_scaffold_3_2
unknown

Not on your lists

406..603
DNA (198bp) protein (66aa)

This feature has no annotations

qs_2_scaffold_3_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

713..1231
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N537_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52986.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_2_scaffold_3_4
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1309..1539)
DNA (231bp) protein (77aa)
AsnC family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9I0_HALJB
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELY40653.1}; Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ADJ14392.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobac
qs_2_scaffold_3_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1539..2234)
DNA (696bp) protein (232aa)
TRK potassium uptake system protein n=1 Tax=Haladaptatus paucihalophilus DX253 PF7_9EURY">RepID=E7QPF7_9EURY
TRK potassium uptake system protein {ECO:0000313|EMBL:EFW94118.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus p
TrkA-N domain-containing protein
qs_2_scaffold_3_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2537..3181)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6J4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53481.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_3_7

Not on your lists

3454..3816
DNA (363bp) protein (121aa)
Uncharacterized protein conserved in archaea n=1 Tax=uncultured archaeon A07HR60 RepID=V4YFD7_9ARCH
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:ESS11811.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
DsrE/DsrF-like family protein
qs_2_scaffold_3_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3938..4990)
DNA (1053bp) protein (351aa)
Biotin--acetyl-CoA-carboxylase ligase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSP2_9EURY
Biotin--acetyl-CoA-carboxylase ligase {ECO:0000313|EMBL:ELZ25663.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
biotin--acetyl-CoA-carboxylase ligase
qs_2_scaffold_3_9
unknown

Not on your lists

comp(5082..5273)
DNA (192bp) protein (64aa)

This feature has no annotations

qs_2_scaffold_3_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5277..5645)
DNA (369bp) protein (123aa)
pterin-4a-carbinolamine dehydratase (EC:4.2.1.96)
Pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML78_9EURY
Pterin-4-alpha-carbinolamine dehydratase {ECO:0000313|EMBL:EMA46123.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
qs_2_scaffold_3_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5893..6945
DNA (1053bp) protein (351aa)
Oxidoreductase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9B1_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:EMA53694.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
putative dehydrogenase
qs_2_scaffold_3_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7538..8518
DNA (981bp) protein (327aa)
ogg; DNA N-glycosylase (EC:3.2.2.-)
3-methyladenine DNA glycosylase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M1N7_9EURY
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:EMA39591.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
qs_2_scaffold_3_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8599..9957
DNA (1359bp) protein (453aa)
Transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAQ5_HALJB
sodium-dependent transporter
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain
qs_2_scaffold_3_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10161..10532)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXA2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37803.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_2_scaffold_3_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10742..12301
DNA (1560bp) protein (520aa)
accB_2; acyl-CoA carboxylase 2, carboxyltransferase component (beta subunit) (EC:6.4.1.-)
Propionyl-CoA carboxylase carboxyltransferase component {ECO:0000313|EMBL:CAI50273.1}; EC=6.4.1.3 {ECO:0000313|EMBL:CAI50273.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacter
Propionyl-CoA carboxylase carboxyltransferase component n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INM9_NATPD
qs_2_scaffold_3_16
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12303..12686
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0ICA7_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB16458.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
qs_2_scaffold_3_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12759..12899
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA38808.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
qs_2_scaffold_3_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12956..13684)
DNA (729bp) protein (243aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5U2_9EURY
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:EMA52035.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase
qs_2_scaffold_3_19
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13691..14191)
DNA (501bp) protein (167aa)
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZXB9_9EURY
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:ELY90247.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba h
alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase
qs_2_scaffold_3_20
unknown

Not on your lists

14260..14784
DNA (525bp) protein (175aa)

This feature has no annotations

qs_2_scaffold_3_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15637..16038)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0R2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50684.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_3_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16276..16557)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90251.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_2_scaffold_3_23
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17116..18810)
DNA (1695bp) protein (565aa)
(R)-citramalate synthase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R281_HALMT
(R)-citramalate synthase
(R)-citramalate synthase {ECO:0000313|EMBL:ADJ15945.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotga
qs_2_scaffold_3_24
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19117..19371)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI0002FEE22F
Uncharacterized protein {ECO:0000313|EMBL:GAJ40451.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.
yunG; hypothetical protein
qs_2_scaffold_3_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19850..20593)
DNA (744bp) protein (248aa)
Oxidoreductase-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9J7_9EURY
Oxidoreductase-like protein {ECO:0000313|EMBL:EMA54253.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
oxidoreductase
qs_2_scaffold_3_26
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21108..21359)
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92702.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_2_scaffold_3_27
Haloterrigena sp. H13, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21410..21670
DNA (261bp) protein (87aa)
Transcriptional regulator AbrB family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPT5_9EURY
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:KDD77942.1}; TaxID=1416969 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena s
looped-hinge helix DNA binding domain, AbrB family
qs_2_scaffold_3_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21701..22684)
DNA (984bp) protein (328aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5S4_9EURY
flap endonuclease-1
qs_2_scaffold_3_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23552..24190)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44765.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_2_scaffold_3_30
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24370..25509)
DNA (1140bp) protein (380aa)
Class I and II aminotransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQT6_HALMO
Class I and II aminotransferase {ECO:0000313|EMBL:EMA47713.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae
aspartate/tyrosine/aromatic aminotransferase
Displaying items 1-30 of 138 in total

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