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qs_2_scaffold_226

Search features with annotation key words

Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_226_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..265
DNA (264bp) protein (88aa)
Polysaccharide biosynthesis protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI10_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EMA45362.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
membrane protein involved in the export of O-antigen and teichoic acid
qs_2_scaffold_226_2
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(652..1299)
DNA (648bp) protein (216aa)
Glycosyl transferase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P4E2_9EURY
Glycosyl transferase {ECO:0000313|EMBL:EMA63695.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;
glycosyl transferase
qs_2_scaffold_226_3
unknown

Not on your lists

comp(1589..1888)
DNA (300bp) protein (100aa)

This feature has no annotations

qs_2_scaffold_226_4
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2049..2231
DNA (183bp) protein (61aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0Z9_HALTV
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB63046.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena t
qs_2_scaffold_226_5
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2391..3308
DNA (918bp) protein (306aa)
short-chain family oxidoreductase (EC:1.1.1.-)
Putative oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GVK5_HALVD
3-alpha-(Or 20-beta)-hydroxysteroid dehydrogenase {ECO:0000313|EMBL:CQR50487.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofe
qs_2_scaffold_226_6
unknown

Not on your lists

3308..3499
DNA (192bp) protein (64aa)

This feature has no annotations

qs_2_scaffold_226_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3960..4571
DNA (612bp) protein (204aa)
Regulatory protein TetR n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC75_9EURY
Regulatory protein TetR {ECO:0000313|EMBL:EMA55547.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
regulatory protein TetR
qs_2_scaffold_226_8
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4678..5271)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IWC8_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01011.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
qs_2_scaffold_226_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5517..5876)
DNA (360bp) protein (120aa)
50S ribosomal protein L12 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKC4_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharoly
50S ribosomal protein L12P
qs_2_scaffold_226_10

Not on your lists


comp(5946..7103)
DNA (1158bp) protein (386aa)
50S ribosomal protein L10 n=1 Tax=uncultured archaeon A07HR67 RepID=V4X5G1_9ARCH
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1412871 species="Archaea; environmental samples.;" source="unc
50S ribosomal protein L10
qs_2_scaffold_226_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7103..7741)
DNA (639bp) protein (213aa)
50S ribosomal protein L1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHL1_9EURY
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
50S ribosomal protein L10Ae (L1p)
qs_2_scaffold_226_12

Not on your lists

8000..8683
DNA (684bp) protein (228aa)
Haloacid dehalogenase family protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XQ80_9ARCH
Haloacid dehalogenase family protein {ECO:0000313|EMBL:ESS10629.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
HAD-superfamily hydrolase
qs_2_scaffold_226_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8804..9316)
DNA (513bp) protein (171aa)
50S ribosomal protein L11 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GP58_9EURY
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
rplK; 50S ribosomal protein L11
qs_2_scaffold_226_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9867..10487
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDF9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55896.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_226_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10492..11169
DNA (678bp) protein (226aa)
CAAX amino terminal protease family protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NGV3_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EMA55895.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
protease
qs_2_scaffold_226_16
unknown

Not on your lists

comp(11442..11768)
DNA (327bp) protein (109aa)

This feature has no annotations

qs_2_scaffold_226_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11809..13044)
DNA (1236bp) protein (412aa)
Potassium channel-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0QTB0_9EURY
Potassium channel-like protein {ECO:0000313|EMBL:EMA52696.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
Kef-type K+ ransport system NAD-binding protein
qs_2_scaffold_226_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13275..15179
DNA (1905bp) protein (635aa)
Glycine betaine transporter BetL n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQB1_9EURY
Glycine betaine transporter BetL {ECO:0000313|EMBL:EMA47917.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
choline-glycine betaine transporter
qs_2_scaffold_226_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15258..16604)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6T8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53637.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_226_20
unknown

Not on your lists

comp(16743..16955)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_2_scaffold_226_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17086..18102)
DNA (1017bp) protein (339aa)
Transcription initiation factor IIB n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7V0_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
transcription initiation factor TFB
qs_2_scaffold_226_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18215..18832
DNA (618bp) protein (206aa)
Ribonuclease H n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N962_9EURY
Ribonuclease H {ECO:0000313|EMBL:EMA53639.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ribonuclease H
qs_2_scaffold_226_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18825..19532
DNA (708bp) protein (236aa)
RnhA operon protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQP4_9EURY
RnhA operon protein {ECO:0000313|EMBL:EMA48022.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
hypothetical protein
qs_2_scaffold_226_24
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19627..19986)
DNA (360bp) protein (120aa)
Transcriptional regulator n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HI19_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ83438.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959
transcriptional regulator
qs_2_scaffold_226_25
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20233..20766
DNA (534bp) protein (178aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=662476 species="Arc
ipp; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JY31_9EURY
qs_2_scaffold_226_26
unknown

Not on your lists

comp(21654..21806)
DNA (153bp) protein (51aa)

This feature has no annotations

qs_2_scaffold_226_27
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22341..22823
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K2B8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA14274.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
qs_2_scaffold_226_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22825..23880
DNA (1056bp) protein (352aa)
Integrase family protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ13_9EURY
Integrase family protein {ECO:0000313|EMBL:EFW90429.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophi
XerC/D-like integrase
qs_2_scaffold_226_29
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24348..25490)
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MR78_HALMO
Acyl-CoA dehydrogenase domain-containing protein {ECO:0000313|EMBL:EMA48116.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
acyl-CoA dehydrogenase domain-containing protein
qs_2_scaffold_226_30
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25670..28234)
DNA (2565bp) protein (855aa)
Light and redox sensing histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWF6_9EURY
Light and redox sensing histidine kinase {ECO:0000313|EMBL:ELZ27551.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
putative signal-transducing histidine kinase / response regulator
Displaying items 1-30 of 62 in total

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