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qs_2_scaffold_322

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_322_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..777
DNA (777bp) protein (259aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGC9_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ33868.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
qs_2_scaffold_322_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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774..1028
DNA (255bp) protein (85aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGC9_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ33868.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;"
oligopeptide/dipeptide ABC transporter ATP-binding protein
qs_2_scaffold_322_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1038..2507)
DNA (1470bp) protein (490aa)
Zn-dependent protease-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEH3_9EURY
Zn-dependent protease-like protein {ECO:0000313|EMBL:ELZ33870.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
zn-dependent protease-like protein
qs_2_scaffold_322_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2656..2916)
DNA (261bp) protein (87aa)
N-acetyltransferase GCN5 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5U6_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELZ30850.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
N-acetyltransferase GCN5
qs_2_scaffold_322_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3035..3466
DNA (432bp) protein (144aa)
ArsR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGS9_9EURY
ArsR family transcriptional regulator {ECO:0000313|EMBL:ELZ33927.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
ArsR family transcriptional regulator
qs_2_scaffold_322_6
unknown

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3467..3670
DNA (204bp) protein (68aa)

This feature has no annotations

qs_2_scaffold_322_7

Not on your lists

3694..5520
DNA (1827bp) protein (609aa)
Threonine ammonia-lyase (EC:4.3.1.19)
Threonine ammonia-lyase {ECO:0000313|EMBL:AEN06953.1}; EC=4.3.1.19 {ECO:0000313|EMBL:AEN06953.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Threonine ammonia-lyase n=1 Tax=halophilic archaeon DL31 RepID=G2MN24_9ARCH
qs_2_scaffold_322_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5582..5824)
DNA (243bp) protein (81aa)
hypothetical protein id=24614959 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88468.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_2_scaffold_322_9
unknown

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6054..6473
DNA (420bp) protein (140aa)

This feature has no annotations

qs_2_scaffold_322_10
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6637..8016
DNA (1380bp) protein (460aa)
nucleotidyltransferase/DNA polymerase involved in DNA repair; K04479 DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7] id=24617751 bin=Halonotius_J07HN4 species=unknown genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1070774 species="Archaea; Euryarchaeota; Halo
nucleotidyltransferase/DNA polymerase
qs_2_scaffold_322_11
Nodularia spumigena, Nodularia, Nostocales, Cyanobacteria, Bacteria

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comp(8097..9701)
DNA (1605bp) protein (535aa)
Twin-arginine translocation pathway signal n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZCI9_NODSP
Uncharacterized protein {ECO:0000313|EMBL:AHJ30985.1}; TaxID=313624 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nodularia.;" source="Nodularia spumigena CCY9414.;"
hypothetical protein
qs_2_scaffold_322_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10056..10622
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MID0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45467.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
glycine-rich protein
qs_2_scaffold_322_13
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10785..12200)
DNA (1416bp) protein (472aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZNV9_9EURY
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ELY88019.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanen
NADH:flavin oxidoreductase
qs_2_scaffold_322_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12352..13773
DNA (1422bp) protein (474aa)
Flavin-dependent dehydrogenase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NQN2_HALBP
flavin-dependent dehydrogenase
Flavin-dependent dehydrogenase {ECO:0000313|EMBL:ADQ66720.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum bori
qs_2_scaffold_322_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14068..15162
DNA (1095bp) protein (365aa)
Pre-peptidase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBK4_9EURY
Pre-peptidase {ECO:0000313|EMBL:EMA43126.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
hypothetical protein
qs_2_scaffold_322_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15453..16508)
DNA (1056bp) protein (352aa)
phytoene/squalene synthetase (EC:2.5.1.21)
Squalene/phytoene synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI68_9EURY
Squalene/phytoene synthase {ECO:0000313|EMBL:EMA45391.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolytic
qs_2_scaffold_322_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16877..18019
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase n=1 Tax=Halogranum salarium B-1 RepID=J3JI75_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EJN61606.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
acd; acyl-CoA dehydrogenase
qs_2_scaffold_322_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18125..18469
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CSR8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26310.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_2_scaffold_322_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18588..19523)
DNA (936bp) protein (312aa)
Alpha/beta hydrolase fold protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJG6_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EMA45821.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
alpha/beta hydrolase fold protein
qs_2_scaffold_322_20
unknown

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comp(19586..20239)
DNA (654bp) protein (218aa)

This feature has no annotations

qs_2_scaffold_322_21
unknown

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comp(20376..20723)
DNA (348bp) protein (116aa)

This feature has no annotations

qs_2_scaffold_322_22
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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21064..21147
DNA (84bp) protein (28aa)
Transcription regulator {ECO:0000313|EMBL:AAV46463.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
Displaying 22 items

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