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qs_2_scaffold_534

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_534_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..315
DNA (315bp) protein (105aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; N
Non-canonical purine NTP pyrophosphatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNF9_9EURY
Ham1 family protein
qs_2_scaffold_534_2
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

534..887
DNA (354bp) protein (118aa)
Transcriptional regulator n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MXU6_HALMO
Transcriptional regulator {ECO:0000313|EMBL:EMA49255.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 13
transcriptional regulator
qs_2_scaffold_534_3
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(962..1456)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CFI5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22001.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
qs_2_scaffold_534_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1684..2307)
DNA (624bp) protein (208aa)
Spermidine/putrescine ABC transporter ATPase component n=1 Tax=Halogranum salarium B-1 RepID=J3EUW1_9EURY
Spermidine/putrescine ABC transporter ATPase component {ECO:0000313|EMBL:EJN58247.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum s
spermidine/putrescine ABC transporter ATPase component
qs_2_scaffold_534_5
unknown

Not on your lists

2537..2740
DNA (204bp) protein (68aa)

This feature has no annotations

qs_2_scaffold_534_6

Not on your lists

comp(2701..3735)
DNA (1035bp) protein (345aa)
ABC-type transporter, integral membrane subunit n=1 Tax=halophilic archaeon DL31 RepID=G2MK54_9ARCH
ABC transporter
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEN05476.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_2_scaffold_534_7

Not on your lists

comp(3766..4998)
DNA (1233bp) protein (411aa)
Extracellular solute-binding protein family 1 n=1 Tax=halophilic archaeon DL31 RepID=G2MK53_9ARCH
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEN05475.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_2_scaffold_534_8
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5136..5825
DNA (690bp) protein (230aa)
DNA-binding domain of ModE / Molybdate-binding domain of ModE n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A555_9EURY
DNA-binding domain of ModE / Molybdate-binding domain of ModE {ECO:0000313|EMBL:GAD52774.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="H
transcriptional regulator, ModE family
qs_2_scaffold_534_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6330..6995)
DNA (666bp) protein (222aa)
TRK potassium uptake system protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMS7_HALVA
TRK potassium uptake system protein {ECO:0000313|EMBL:EMA09279.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula valli
trkA6; TRK potassium uptake system protein
qs_2_scaffold_534_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7150..7926)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB27_9EURY
UPF0218 protein C450_03877 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
conserved hypothetical protein (DUF359)
qs_2_scaffold_534_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7930..8127)
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=2 Tax=Halococcus RepID=M0N3U6_HALMO
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
DNA-directed RNA polymerase subunit E, RpoE2
qs_2_scaffold_534_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8131..8706)
DNA (576bp) protein (192aa)
rpoE'; DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:AHB64571.1}; EC=2.7.7.6 {ECO:0000313|EMBL:AHB64571.1};; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
DNA-directed RNA polymerase subunit E n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KX16_9EURY
qs_2_scaffold_534_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8709..9299)
DNA (591bp) protein (197aa)
Putative RNA-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD57_9EURY
Putative RNA-binding protein {ECO:0000313|EMBL:EMA43702.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
SSU processome protein utp24
qs_2_scaffold_534_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9309..10544)
DNA (1236bp) protein (412aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD90_9EURY
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227455 species="Arc
tif2g; translation initiation factor IF-2 subunit gamma
qs_2_scaffold_534_15
unknown

Not on your lists

comp(10678..11283)
DNA (606bp) protein (202aa)

This feature has no annotations

qs_2_scaffold_534_16
unknown

Not on your lists

comp(11469..11705)
DNA (237bp) protein (79aa)

This feature has no annotations

qs_2_scaffold_534_17
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11922..12161
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RSX5_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB60855.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qs_2_scaffold_534_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12238..13185
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55180.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_534_19
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13246..13578)
DNA (333bp) protein (111aa)
Heavy metal translocating P-type ATPase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LWE6_HALLT
heavy metal translocating P-type ATPase
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ACM58536.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacus
qs_2_scaffold_534_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13578..15518)
DNA (1941bp) protein (647aa)
Heavy metal translocating P-type ATPase (Fragment) n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJY5_9EURY
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EMA45992.1}; Flags: Fragment;; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" s
heavy metal translocating P-type ATPase
qs_2_scaffold_534_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15648..16193
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CES9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21148.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_2_scaffold_534_22
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16343..16546
DNA (204bp) protein (68aa)
Heavy metal transport/detoxification protein n=2 Tax=Archaea RepID=B9LW18_HALLT
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:ADB60565.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrig
qs_2_scaffold_534_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16694..17599)
DNA (906bp) protein (302aa)
Sodium symporter n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MYC1_9EURY
Sodium symporter {ECO:0000313|EMBL:EMA50318.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552
sodium symporter
qs_2_scaffold_534_24
unknown

Not on your lists

comp(17581..17811)
DNA (231bp) protein (77aa)

This feature has no annotations

qs_2_scaffold_534_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17930..18628
DNA (699bp) protein (233aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0LTD7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36822.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_2_scaffold_534_26
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18753..19577)
DNA (825bp) protein (275aa)
Beta-lactamase n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZFU9_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELY84043.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
ATP-binding protein
qs_2_scaffold_534_27

Not on your lists

comp(19617..19838)
DNA (222bp) protein (74aa)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=halophilic archaeon DL31 RepID=G2MG86_9ARCH
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:AEN05980.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_2_scaffold_534_28
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19835..20593)
DNA (759bp) protein (253aa)
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PMQ2_9EURY
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERG95017.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqua
ABC transporter
qs_2_scaffold_534_29
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20590..21315)
DNA (726bp) protein (242aa)
Amino acid/amide ABC transporter ATP-binding protein 1, haat family n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MM56_9EURY
Amino acid/amide ABC transporter ATP-binding protein 1, haat family {ECO:0000313|EMBL:EMA46453.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma
amino acid/amide ABC transporter ATP-binding protein 1, HAAT family
qs_2_scaffold_534_30
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21312..22316)
DNA (1005bp) protein (335aa)
ABC transporter integral membrane subunit; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ABC-type transporter, integral membrane subunit id=2475301 bin=GWC2_Methylomirabilis_70_16 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amino acid ABC transporter
Displaying items 1-30 of 33 in total

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