ggKbase home page

qs_2_scaffold_216

Search features with annotation key words

Displaying items 1-30 of 43 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_216_1
Haloarcula sp. D1, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..666
DNA (666bp) protein (222aa)
Acetyl-CoA synthetase (ADP-forming) beta subunit n=1 Tax=Haloarcula sp. D1 RepID=Q330N5_9EURY
Acetyl-CoA synthetase (ADP-forming) beta subunit {ECO:0000313|EMBL:AAQ79812.1}; TaxID=242927 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Hal
hypothetical protein
qs_2_scaffold_216_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

663..1064
DNA (402bp) protein (134aa)
Putative 4-hydroxybenzoyl CoA thioesterase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D725_9EURY
Putative 4-hydroxybenzoyl CoA thioesterase {ECO:0000313|EMBL:ELZ31301.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
hypothetical protein
qs_2_scaffold_216_3
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1271..1444
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQR9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01602.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qs_2_scaffold_216_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1537..2676
DNA (1140bp) protein (380aa)
Gentisate 1,2-dioxygenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D044_9EURY
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:ELZ28022.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
phdI; gentisate 1,2-dioxygenase
qs_2_scaffold_216_5
Haloarcula sp. D1, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2881..4143
DNA (1263bp) protein (421aa)
Leu/Ile/Val-binding protein (Fragment) n=1 Tax=Haloarcula sp. D1 RepID=Q330N2_9EURY
Leu/Ile/Val-binding protein {ECO:0000313|EMBL:AAQ79815.1}; Flags: Fragment;; TaxID=242927 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloar
livJ1; putative branched-chain amino acids ABC transporter periplasmic substrate-binding protein
qs_2_scaffold_216_6
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4154..5020
DNA (867bp) protein (289aa)
Inner-membrane translocator n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK71_SYNFM
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABK17823.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Sy
qs_2_scaffold_216_7
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5017..6186
DNA (1170bp) protein (390aa)
Inner-membrane translocator n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0G9P6_9BURK
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
inner-membrane translocator
qs_2_scaffold_216_8
Geobacillus sp. JF8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6244..6948)
DNA (705bp) protein (235aa)
Amino acid ABC transporter ATPase n=1 Tax=Geobacillus sp. JF8 RepID=S6A3R8_9BACI
amino acid ABC transporter ATPase
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:AGT33316.1}; TaxID=1345697 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. JF8.;"
qs_2_scaffold_216_9
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7090..7968)
DNA (879bp) protein (293aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9A6_9EURY
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:ELZ31302.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halo
hypothetical protein
qs_2_scaffold_216_10
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8500..9693
DNA (1194bp) protein (398aa)
ABC-type transport system, substrate-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EI58_9EURY
ABC-type transport system, substrate-binding protein {ECO:0000313|EMBL:ELZ46763.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
ABC transporter
qs_2_scaffold_216_11
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9713..11341
DNA (1629bp) protein (543aa)
ABC-type ribose transport system, ATP-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EK08_9EURY
ABC-type ribose transport system, ATP-binding protein {ECO:0000313|EMBL:ELZ46764.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="H
tsgD11; putative sugar ABC transporter ATP-binding protein
qs_2_scaffold_216_12
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11338..12726
DNA (1389bp) protein (463aa)
Ribose/branched-chain amino acids ABC transporter permease n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EG74_9EURY
Ribose/branched-chain amino acids ABC transporter permease {ECO:0000313|EMBL:ELZ46765.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
ABC-type transport system permease protein (probable substrate sugar)
qs_2_scaffold_216_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12723..13964
DNA (1242bp) protein (414aa)
Inner-membrane translocator n=1 Tax=Halobacterium sp. DL1 RepID=G4IF14_9EURY
Ribose ABC transporter permease {ECO:0000313|EMBL:AHG03645.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp.
ABC transporter
qs_2_scaffold_216_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14203..16320
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D337_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29268.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_2_scaffold_216_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16388..18571
DNA (2184bp) protein (728aa)
beta-glucosidase, family GH3 (EC:3.2.1.21) id=24615524 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
beta-glucosidase, family GH3 (EC:3.2.1.21)
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:ESP87067.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" sourc
qs_2_scaffold_216_16
unknown

Not on your lists

18790..18972
DNA (183bp) protein (61aa)

This feature has no annotations

qs_2_scaffold_216_17
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19175..20920)
DNA (1746bp) protein (582aa)
Molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JM99_HALVA
Molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein {ECO:0000313|EMBL:EMA09094.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
moeA2; LysR family transcriptional regulator
qs_2_scaffold_216_18
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20917..22155)
DNA (1239bp) protein (413aa)
Molybdenum cofactor synthesis protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLT1_HALJP
Molybdenum cofactor synthesis protein {ECO:0000313|EMBL:EMA32985.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ja
moeA1; molybdopterin biosynthesis protein moeA
qs_2_scaffold_216_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22351..23448)
DNA (1098bp) protein (366aa)
Sulfate transporter family permease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0C8X0_9EURY
Sulfate transporter family permease {ECO:0000313|EMBL:ELZ19680.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
cysT3; sulfate transporter family permease
qs_2_scaffold_216_20
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23552..23827)
DNA (276bp) protein (92aa)
DNA-binding domain of ModE / Molybdate-binding domain of ModE n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A555_9EURY
DNA-binding domain of ModE / Molybdate-binding domain of ModE {ECO:0000313|EMBL:GAD52774.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="H
ModE family transcriptional regulator
qs_2_scaffold_216_21
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24245..25183
DNA (939bp) protein (313aa)
Molybdate transporter n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NN30_9EURY
Molybdate transporter {ECO:0000313|EMBL:EMA59216.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.
ABC-type transport system periplasmic substrate-binding protein (probable substrate sulfate/tungstate)
qs_2_scaffold_216_22
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25186..25902
DNA (717bp) protein (239aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LQL3_HALLT
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACM57634.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubru
qs_2_scaffold_216_23
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25899..26675
DNA (777bp) protein (259aa)
ABC transporter n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PCY4_9EURY
ABC transporter {ECO:0000313|EMBL:EMA67733.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
ABC transporter
qs_2_scaffold_216_24
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26672..27736)
DNA (1065bp) protein (355aa)
cysA; ABC-type transport system ATP-binding protein (probable substrate sulfate/thiosulfate/molybdate) id=24613467 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
ABC-type transport system ATP-binding protein (Probable substrate sulfate/thiosulfate/molybdate) {ECO:0000313|EMBL:ESP90103.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteri
cysA; ABC-type transport system ATP-binding protein (probable substrate sulfate/thiosulfate/molybdate)
qs_2_scaffold_216_25
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27733..28542)
DNA (810bp) protein (270aa)
NifC-like ABC-type porter n=1 Tax=Halobacterium sp. DL1 RepID=G4IEM7_9EURY
Sulfate ABC transporter permease {ECO:0000313|EMBL:AHG03702.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp
ABC transporter permease
qs_2_scaffold_216_26
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28517..29422)
DNA (906bp) protein (302aa)
ABC transporter substrate-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D5D0_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ29892.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
ABC transporter substrate-binding protein
qs_2_scaffold_216_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29482..29901
DNA (420bp) protein (140aa)
Transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D2Y6_9EURY
Transcriptional regulator {ECO:0000313|EMBL:ELZ29891.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
tfx; putative transcriptional regulator
qs_2_scaffold_216_28
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29995..30720
DNA (726bp) protein (242aa)
Anaerobic dehydrogenase cluster protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YAJ1_9EURY
Anaerobic dehydrogenase cluster protein {ECO:0000313|EMBL:ELY71079.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versifor
dehydrogenase
qs_2_scaffold_216_29
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30773..30973)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LHX3_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA32688.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_2_scaffold_216_30
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30970..31602)
DNA (633bp) protein (211aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; G
molybdenum cofactor guanylyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI00037EDDAC
molybdopterin-guanine dinucleotide biosynthesis protein A
Displaying items 1-30 of 43 in total

View Taxonomy