ggKbase home page

qs_2_scaffold_235

Search features with annotation key words

Displaying 30 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_235_1
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

439..801
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K3G2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39807.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
qs_2_scaffold_235_2
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

805..1263
DNA (459bp) protein (153aa)
PilT protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2F2D7_9EURY
PilT protein {ECO:0000313|EMBL:ERJ04560.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
hypothetical protein
qs_2_scaffold_235_3
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1229..2380)
DNA (1152bp) protein (384aa)
Oxidoreductase domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY30_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01619.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qs_2_scaffold_235_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2556..3365)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J4C9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP90222.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_2_scaffold_235_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3367..4077)
DNA (711bp) protein (237aa)
Putative sugar ABC transporter ATP-binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MWD1_9EURY
Putative sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA49618.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
sugar ABC transporter ATP-binding protein
qs_2_scaffold_235_6
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4224..4499
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloferax sp. ATCC BAA-645 RepID=M0FQF4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ61498.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-645.;"
qs_2_scaffold_235_7
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4474..5409)
DNA (936bp) protein (312aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DD70_HALXS
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AHG01413.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii
qs_2_scaffold_235_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5411..6388)
DNA (978bp) protein (326aa)
ABC-type transport system permease protein (Probable substrate sugar) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQB4_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:EMA49616.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
ABC transporter permease
qs_2_scaffold_235_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6388..7845)
DNA (1458bp) protein (486aa)
Sugar ABC transporter substrate-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3EW99_9EURY
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:EJN59107.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium
tsgA3; putative sugar ABC transporter periplasmic substrate-binding protein
qs_2_scaffold_235_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8051..9979)
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20326.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
conserved hypothetical membrane protein (DUF2070)
qs_2_scaffold_235_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10321..10869)
DNA (549bp) protein (183aa)
GMP synthase [glutamine-hydrolyzing] subunit A {ECO:0000256|HAMAP-Rule:MF_01510}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_01510};; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_01510}; TaxID=797
GMP synthase [glutamine-hydrolyzing] subunit A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAQ7_9EURY
GMP synthase subunit A
qs_2_scaffold_235_12
unknown

Not on your lists

comp(11744..12328)
DNA (585bp) protein (195aa)

This feature has no annotations

qs_2_scaffold_235_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12457..12960
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEL2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20319.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_2_scaffold_235_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13090..14622
DNA (1533bp) protein (511aa)
(R)-citramalate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCE5_9EURY
(R)-citramalate synthase {ECO:0000313|EMBL:ELZ20318.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
(R)-citramalate synthase
qs_2_scaffold_235_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15108..15329)
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7R035_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW89929.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
qs_2_scaffold_235_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15348..15929)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CD78_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20317.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_2_scaffold_235_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(16046..17446)
DNA (1401bp) protein (467aa)
Sulfatase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZE2_SOLUE
sulfatase
Sulfatase {ECO:0000313|EMBL:ABJ84973.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter us
qs_2_scaffold_235_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17639..18115
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NVP1_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46156.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_2_scaffold_235_19
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18265..19572
DNA (1308bp) protein (436aa)
Peptidase M28 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W836_9EURY
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AGN00274.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
qs_2_scaffold_235_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19618..19908)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAE8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20215.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_2_scaffold_235_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19919..21415)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CA93_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20216.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_2_scaffold_235_22
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21614..22120
DNA (507bp) protein (169aa)
DNA binding domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CRD9_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:ELZ24952.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
DNA binding domain-containing protein
qs_2_scaffold_235_23
unknown

Not on your lists

22382..22525
DNA (144bp) protein (48aa)

This feature has no annotations

qs_2_scaffold_235_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22685..23836
DNA (1152bp) protein (384aa)
acdA; acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSW4_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ24954.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9
qs_2_scaffold_235_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23949..25982
DNA (2034bp) protein (678aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHW6_9EURY
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELZ22223.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source=
PAS/PAC sensor signal transduction histidine kinase
qs_2_scaffold_235_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26025..26555
DNA (531bp) protein (177aa)
HAD-superfamily hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNW0_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:ELZ24955.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
HAD-superfamily hydrolase
qs_2_scaffold_235_27
unknown

Not on your lists

27704..28093
DNA (390bp) protein (130aa)

This feature has no annotations

qs_2_scaffold_235_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28493..28840)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNY8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ24956.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_2_scaffold_235_29
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29017..29250
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LA10_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA30411.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_2_scaffold_235_30
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29247..29468
DNA (222bp) protein (74aa)
Cell division control protein 48 n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J1G2_HALVA
Cell division control protein 48 {ECO:0000313|EMBL:EMA01874.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismo
cdc48b; AAA-type ATPase (CDC48 subfamily)
Displaying 30 items

View Taxonomy