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qs_2_scaffold_879

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_879_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..569
DNA (567bp) protein (189aa)
korA; oxoglutarate--ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.3)
Oxoglutarate--ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:CAI48707.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CAI48707.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteria
Oxoglutarate--ferredoxin oxidoreductase alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IT27_NATPD
qs_2_scaffold_879_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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566..1429
DNA (864bp) protein (288aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CST4_9EURY
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:ELZ25457.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" sourc
2-oxoglutarate ferredoxin oxidoreductase subunit beta
qs_2_scaffold_879_3
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1680..3050
DNA (1371bp) protein (457aa)
Photolyase/cryptochrome n=2 Tax=Haloarcula hispanica RepID=G0HQI7_HALHT
FAD-binding protein
FAD-binding protein {ECO:0000313|EMBL:AJF26915.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
qs_2_scaffold_879_4
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3229..4077
DNA (849bp) protein (283aa)
Digeranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01286}; Short=DGGGP synthase {ECO:0000256|HAMAP-Rule:MF_01286};; Short=DGGGPS {ECO:0000256|HAMAP-Rule:MF_01286};; EC=2.5.1.42 {EC
Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Natrinema gari JCM 14663 RepID=L9YTX3_9EURY
UbiA prenyltransferase
qs_2_scaffold_879_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4195..5427
DNA (1233bp) protein (411aa)
Geranylgeranyl reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CS39_9EURY
Geranylgeranyl reductase {ECO:0000313|EMBL:ELZ25463.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
FAD dependent oxidoreductase
qs_2_scaffold_879_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5542..7233
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUB5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25464.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
EmrB/QacA subfamily drug resistance transporter
qs_2_scaffold_879_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7286..8041
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQF1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25466.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_2_scaffold_879_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8135..8839)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25467.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
putative acetyl-CoA synthetase
qs_2_scaffold_879_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8961..9497)
DNA (537bp) protein (179aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacte
Probable chemoreceptor glutamine deamidase CheD n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR71_9EURY
chemoreceptor glutamine deamidase CheD
qs_2_scaffold_879_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9494..10798)
DNA (1305bp) protein (435aa)
CheA histidine kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CV35_9EURY
CheA histidine kinase {ECO:0000313|EMBL:ELZ25759.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
chemotaxis protein CheA
qs_2_scaffold_879_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10795..11154)
DNA (360bp) protein (120aa)
Response regulator receiver protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NX09_HALMD
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACV46374.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
qs_2_scaffold_879_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11542..11817)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTK8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25752.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_2_scaffold_879_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12037..12372)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR98_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25751.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
transcriptional regulator-like protein
qs_2_scaffold_879_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12551..13276)
DNA (726bp) protein (242aa)
Circadian regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR61_9EURY
Circadian regulator {ECO:0000313|EMBL:ELZ25750.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
circadian regulator CirA
qs_2_scaffold_879_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13495..13944)
DNA (450bp) protein (150aa)
Chemotaxis protein CheW n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CV25_9EURY
Chemotaxis protein CheW {ECO:0000313|EMBL:ELZ25749.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
chemotaxis protein CheW
qs_2_scaffold_879_16
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14119..15078
DNA (960bp) protein (320aa)
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=519442 species="Archaea; Euryarchaeota; Halobact
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUW3_HALUD
qs_2_scaffold_879_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15081..15695
DNA (615bp) protein (205aa)
Chemotaxis protein CheA n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CTK4_9EURY
Chemotaxis protein CheA {ECO:0000313|EMBL:ELZ25747.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
chemotaxis protein CheA
qs_2_scaffold_879_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15704..16954
DNA (1251bp) protein (417aa)
CheA signal transduction histidine kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NX21_HALMD
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase {ECO:0000313|EMBL:ACV46386.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
qs_2_scaffold_879_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17008..17814
DNA (807bp) protein (269aa)
cheR; chemotaxis protein CheR (EC:2.1.1.80)
Chemotaxis protein CheR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR92_9EURY
Chemotaxis protein CheR {ECO:0000313|EMBL:ELZ25746.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_2_scaffold_879_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17857..18444)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSW1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25743.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_2_scaffold_879_trna_1
unknown

Not on your lists

comp(18505..18589)
DNA (85bp)
transferRNA
qs_2_scaffold_879_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18862..20814
DNA (1953bp) protein (651aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate dipeptide/oligopeptide/nickel) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZS5_NATM8
dppA; ABC-type transport system periplasmic substrate-binding protein (probable substrate dipeptide/oligopeptide/nickel)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate dipeptide/oligopeptide) {ECO:0000313|EMBL:CCQ35685.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; H
qs_2_scaffold_879_22

Not on your lists

20889..21863
DNA (975bp) protein (325aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=uncultured archaeon A07HR67 RepID=V4XR86_9ARCH
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ESS02561.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.
binding-protein-dependent transporters inner membrane component
qs_2_scaffold_879_23
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21866..22423
DNA (558bp) protein (186aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LUC1_HALLT
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACM56278.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubru
Displaying 24 items

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