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qs_2_scaffold_393

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_393_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(103..855)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFH7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55440.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_2_scaffold_393_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1006..1437
DNA (432bp) protein (144aa)
(R)-citramalate synthase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC65_9EURY
(R)-citramalate synthase {ECO:0000313|EMBL:EMA55441.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
isopropylmalate/homocitrate/citramalate synthase
qs_2_scaffold_393_3
unknown

Not on your lists

comp(1536..1961)
DNA (426bp) protein (142aa)

This feature has no annotations

qs_2_scaffold_393_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2067..3017
DNA (951bp) protein (317aa)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM15_9EURY
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:EMA46706.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacch
3-hydroxyacyl-CoA dehydrogenase
qs_2_scaffold_393_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3132..3368)
DNA (237bp) protein (79aa)
DtxR family iron (Metal) dependent repressor n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK16_9EURY
DtxR family iron (Metal) dependent repressor {ECO:0000313|EMBL:EMA46017.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
sirR; transcription repressor
qs_2_scaffold_393_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3755..6016)
DNA (2262bp) protein (754aa)
Zinc-transporting ATPase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCF7_9EURY
Zinc-transporting ATPase {ECO:0000313|EMBL:EMA55506.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
zntA1; zinc-transporting ATPase
qs_2_scaffold_393_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6212..6427)
DNA (216bp) protein (72aa)
Universal stress protein uspa-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M153_9EURY
Universal stress protein uspa-like protein {ECO:0000313|EMBL:EMA38354.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
universal stress protein uspa-like protein
qs_2_scaffold_393_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6507..7475)
DNA (969bp) protein (323aa)
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEK5_9EURY
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:EMA55115.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
nucleoside hydrolase
qs_2_scaffold_393_9

Not on your lists

7758..8261
DNA (504bp) protein (168aa)
beta-carotene 15,15'-monooxygenase (EC:1.14.99.36)
Beta-carotene 15,15'-monooxygenase {ECO:0000313|EMBL:AEN06403.1}; EC=1.14.99.36 {ECO:0000313|EMBL:AEN06403.1};; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
Beta-carotene 15,15'-monooxygenase n=1 Tax=halophilic archaeon DL31 RepID=G2MGL2_9ARCH
qs_2_scaffold_393_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

8255..9046
DNA (792bp) protein (264aa)
15,15' beta carotene dioxygenase
15,15' beta carotene dioxygenase {ECO:0000313|EMBL:ABC44374.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
Retinal pigment epithelial membrane protein id=24656949 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_2_scaffold_393_trna_1
unknown

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comp(9044..9116)
DNA (73bp)
transferRNA
qs_2_scaffold_393_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9209..9847
DNA (639bp) protein (213aa)
IMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00705}; EC=3.5.4.10 {ECO:0000256|HAMAP-Rule:MF_00705};; IMP synthase {ECO:0000256|HAMAP-Rule:MF_00705}; Inosinicase {ECO:0000256|HAMAP-Rule:MF_00705}; Tax
IMP cyclohydrolase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC19_9EURY
IMP cyclohydrolase
qs_2_scaffold_393_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9873..10532
DNA (660bp) protein (220aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
serine/threonine protein phosphatase; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) (EC:3.6.1.41 3.1.3.16)
Serine/threonine protein phosphatase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAX2_9EURY
qs_2_scaffold_393_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10516..11706)
DNA (1191bp) protein (397aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME43_9EURY
qs_2_scaffold_393_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11871..12254
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEK1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55110.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_393_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12612..13241)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBW5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55048.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_393_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13625..14485)
DNA (861bp) protein (287aa)
Thiosulfate sulfurtransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAC8_9EURY
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
rhodanese-like protein
qs_2_scaffold_393_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14812..15594
DNA (783bp) protein (261aa)
Rhodanese domain protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEF3_9EURY
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
Rhodanese domain protein
qs_2_scaffold_393_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15872..16531
DNA (660bp) protein (220aa)
DNA binding domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEA6_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EMA42750.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
DNA binding domain-containing protein
qs_2_scaffold_393_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16562..17239)
DNA (678bp) protein (226aa)
probable S-adenosylmethionine-dependent methyltransferase (homolog to 24-sterol C-methyltransferase) (EC:2.1.1.-)
Methyltransferase type 11 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAD3_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA42752.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
qs_2_scaffold_393_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17378..17728
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB25_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42753.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_2_scaffold_393_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18064..18642
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEF0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55040.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_393_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18662..19444)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBV8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55038.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_393_23
unknown

Not on your lists

comp(19450..19539)
DNA (90bp) protein (30aa)

This feature has no annotations

qs_2_scaffold_393_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19654..21429)
DNA (1776bp) protein (592aa)
Ammonium transporter n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6R9_9EURY
Ammonium transporter {ECO:0000313|EMBL:EMA41492.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.
Rh family protein/ammonium transporter
qs_2_scaffold_393_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21742..23520)
DNA (1779bp) protein (593aa)
acd_7; acyl-CoA dehydrogenase 7 (EC:1.3.99.3)
Acyl-CoA dehydrogenase 7 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDR3_9EURY
Acyl-CoA dehydrogenase 7 {ECO:0000313|EMBL:EMA43886.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qs_2_scaffold_393_26
unknown

Not on your lists

23682..24071
DNA (390bp) protein (130aa)

This feature has no annotations

qs_2_scaffold_393_27
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24160..25140)
DNA (981bp) protein (327aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Delta-aminolevulinic acid dehydratase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J600_HALVA
qs_2_scaffold_393_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25227..25754
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBG0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54903.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_2_scaffold_393_29
unknown

Not on your lists

comp(26103..26168)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 30 items

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