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qs_2_scaffold_1356

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_1356_1
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..672
DNA (672bp) protein (224aa)
PAS domain S-box n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IC85_HALRX
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AGB15816.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 / JCM 13
qs_2_scaffold_1356_2
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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669..962
DNA (294bp) protein (98aa)
PAS domain S-box n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IC85_HALRX
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AGB15816.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 / JCM 13
qs_2_scaffold_1356_3

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comp(981..1283)
DNA (303bp) protein (101aa)
Beta-carotene 15,15''-monooxygenase, Brp/Blh family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XW33_9ARCH
Beta-carotene 15,15''-monooxygenase, Brp/Blh family {ECO:0000313|EMBL:ESS06423.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
Beta-carotene 15,15'-monooxygenase, Brp/Blh family
qs_2_scaffold_1356_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1881..2594)
DNA (714bp) protein (238aa)
crtY; lycopene cyclase (EC:1.14.-.-)
Lycopene beta-cyclase {ECO:0000313|EMBL:CAI48417.1}; EC=5.5.1.19 {ECO:0000313|EMBL:CAI48417.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
Lycopene beta-cyclase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITW6_NATPD
qs_2_scaffold_1356_5
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2688..3413)
DNA (726bp) protein (242aa)
Rhodopsin n=3 Tax=Haloarcula RepID=V5TJJ0_HALHI
rhodopsin
Rhodopsin {ECO:0000313|EMBL:AHB64865.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;"
qs_2_scaffold_1356_6
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3524..4069
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DPG7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37375.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
qs_2_scaffold_1356_7
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4748..5875)
DNA (1128bp) protein (376aa)
Amino acid/amide ABC transporter membrane protein 2, haat family n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W994_9EURY
amino acid/amide ABC transporter membrane protein 2, haat family
Amino acid/amide ABC transporter membrane protein 2, haat family {ECO:0000313|EMBL:AGN01289.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.
qs_2_scaffold_1356_8
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6231..7223)
DNA (993bp) protein (331aa)
Inner-membrane translocator n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7X5_9EURY
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AGN01288.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-B
qs_2_scaffold_1356_9
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7220..7918)
DNA (699bp) protein (233aa)
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0ICU2_HALRX
ABC-type branched-chain amino acid transport systems, ATPase component
ABC-type branched-chain amino acid transport systems, ATPase component {ECO:0000313|EMBL:AGB16653.1}; Flags: Precursor;; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natri
qs_2_scaffold_1356_10
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7915..8766)
DNA (852bp) protein (284aa)
ABC transporter n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P0V1_9EURY
ABC transporter {ECO:0000313|EMBL:EMA63792.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
amino acid/amide ABC transporter ATP-binding protein 1, haat family
qs_2_scaffold_1356_11
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8768..10180)
DNA (1413bp) protein (471aa)
Branched-chain amino acid ABC transporter amino acid-binding protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VVQ8_9EURY
branched-chain amino acid ABC transporter amino acid-binding protein
Branched-chain amino acid ABC transporter amino acid-binding protein {ECO:0000313|EMBL:AGN01285.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarcha
qs_2_scaffold_1356_12
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11231..11935)
DNA (705bp) protein (235aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DQN5_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:CDK38517.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="
DNA-binding protein
qs_2_scaffold_1356_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12283..13599
DNA (1317bp) protein (439aa)
lipase, class 2 (EC:3.1.1.-)
Lipase, class 2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTM4_NATM8
EstB-type esterase domain protein {ECO:0000313|EMBL:CCQ37867.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
qs_2_scaffold_1356_14
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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13666..14538
DNA (873bp) protein (291aa)
D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C379_9EURY
short-chain dehydrogenase/reductase SDR
D-beta-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:ELZ17108.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena lim
qs_2_scaffold_1356_15
unknown

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comp(14595..16070)
DNA (1476bp) protein (492aa)

This feature has no annotations

qs_2_scaffold_1356_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16193..16501
DNA (309bp) protein (103aa)
DNA mismatch repair protein MutS n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKI9_NATM8
mutS5b; DNA mismatch repair protein MutS
DNA mismatch repair protein MutS {ECO:0000313|EMBL:CCQ35979.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas mool
Displaying 16 items

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